Protein

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Genbank accession
YP_010064509.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAITTVYTYPLNGSQQDFTVPFEYLARRFVSVTLIGTAGRRKLILTTDFRFTSSTSIRTNVLWTPASGYSWIEVRRETSASERLVDFTDGSILRASDMNVSQVQTLHVAEEARNAVTDTIGTDTNGNLDARARRIVNVADAVDPGDAVNLHMNQQWAGSALNQANRSEQQANASANSASQSASSASAAATSVTLTAQYRDTTLTYRNAAETFKNQAGSSQSAAAASETSASKWAANPEDQPVADSRYSSLHYSRKSAASATASANSASASAAQVPLAAAEADRAKTEADRAKTEADKLGNMNSLGGALDTVSGTTVIWKDKQSSKTGGFEARLGADNEANFSMTAADGSDPIRLVRTADRIVHLYDNSGGGDRMLWSSTGVTIPKNLTVNGVSTFVGNAAFSGQITAGTIVSGGSVRSNSGMFASFASSASSNAHLWFYDNLGNTRGIIYAQQSNIVTLQAGSAVAANFHPDGRAAFNNMTSGSQDAQGRIAAFRNGVWPAAGMYQGGHFMAQTDDGSCPSYGFHRGGSYALALYLSGNSLFMMDSSGLNREVLNNTNLGAWLISVGEQGVGSYAFCRAAITATYGMDLAGGNISYGSTGANGGSCPGTWRSRGWAGGGNHTLFQRVA
Physico‐chemical
properties
protein length:628 AA
molecular weight: 65854,46290 Da
isoelectric point:6,76796
aromaticity:0,08121
hydropathy:-0,28551

Domains

Domains [InterPro]
DC_0044
STR
1–625
DC_0044
IPR005604
ATT
3–130
IPR005604 Coil
YP_010064509.1
1 628
Architecture
ATT
STR
ATT 1-130 | STR 131-625 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010064509.1
1 628
Domain Start End Length (AA) Confidence
N-terminal 1 280 280 0,8024
Central domain 281 479 200 0,4904
C-terminal 480 628 148 0,9329
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-280
Central
281-479
C-terminal
480-628

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PsyP_3MF5
[NCBI] 		2749426 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010064509.1 [NCBI]
Genbank nucleotide accession
NC_054890.1 [NCBI]
CDS location
range 34129 -> 36015
strand +
CDS
ATGGCGATTACAACCGTTTATACCTATCCGTTGAATGGGAGCCAGCAGGACTTTACGGTCCCTTTCGAGTACCTCGCACGGCGCTTTGTGTCCGTCACCTTGATTGGTACTGCGGGTAGACGAAAGCTGATCCTCACAACGGACTTTAGGTTCACTTCAAGTACATCCATCCGAACTAACGTCCTGTGGACACCTGCCTCAGGTTACTCCTGGATCGAAGTTCGCCGGGAGACCAGTGCGTCTGAGCGTCTGGTGGACTTCACGGATGGCTCCATTCTGCGCGCCTCTGACATGAACGTGTCCCAGGTCCAGACCCTCCATGTGGCCGAAGAGGCCCGTAACGCGGTGACGGATACCATTGGTACTGACACCAACGGGAACCTGGATGCCCGAGCACGGCGCATCGTCAACGTGGCAGATGCTGTCGATCCTGGGGATGCGGTGAACCTCCACATGAACCAGCAGTGGGCTGGCTCTGCGTTAAACCAAGCGAACCGCTCGGAGCAGCAGGCCAACGCCTCTGCGAACTCTGCGAGTCAATCGGCAAGCTCTGCGAGTGCCGCTGCGACCTCTGTGACCTTGACGGCTCAGTATCGGGACACAACGCTGACCTACCGGAACGCCGCTGAGACCTTCAAGAACCAAGCGGGTAGCTCTCAGTCTGCCGCTGCGGCCTCGGAGACCAGCGCATCGAAGTGGGCAGCGAACCCTGAGGATCAACCGGTAGCTGACTCTCGGTATTCGTCGCTGCACTACAGCCGTAAGTCTGCTGCAAGTGCAACCGCAAGTGCCAACTCGGCTTCCGCAAGTGCCGCCCAGGTTCCCTTAGCTGCCGCTGAGGCTGACCGTGCGAAGACTGAGGCTGACCGTGCGAAGACTGAGGCCGATAAGCTGGGCAACATGAACTCGCTTGGTGGTGCTCTGGATACTGTGAGCGGCACTACCGTCATCTGGAAGGATAAGCAATCATCCAAGACTGGGGGCTTCGAGGCCCGCCTCGGCGCTGACAACGAAGCTAACTTCTCCATGACTGCCGCAGACGGCTCTGATCCGATTAGATTGGTGCGTACTGCTGACCGAATTGTCCACCTGTATGACAACTCTGGTGGTGGCGACCGGATGCTTTGGAGTTCCACTGGCGTGACGATTCCGAAGAATCTCACTGTCAACGGTGTGTCTACTTTTGTAGGGAACGCCGCGTTCAGCGGTCAGATCACTGCCGGGACTATCGTATCTGGTGGCTCTGTGCGTTCTAACAGCGGTATGTTCGCAAGCTTCGCGTCCAGTGCGTCTTCTAACGCCCACTTGTGGTTCTACGACAACCTTGGCAACACCCGTGGGATCATCTACGCACAGCAGAGCAACATAGTCACACTCCAAGCTGGCAGTGCCGTGGCAGCGAACTTCCACCCGGATGGAAGGGCTGCGTTCAACAACATGACATCTGGATCACAGGATGCTCAAGGTCGTATTGCTGCATTCCGCAATGGTGTATGGCCTGCTGCTGGAATGTATCAGGGCGGTCATTTCATGGCTCAGACCGATGATGGTTCTTGTCCGTCCTACGGGTTCCACCGTGGCGGCTCCTACGCTCTCGCACTGTACCTGAGCGGAAACAGTCTGTTCATGATGGACTCCTCAGGCCTGAACCGTGAGGTCCTGAACAACACGAACTTGGGCGCGTGGCTGATTAGCGTTGGGGAACAAGGTGTGGGCTCGTATGCGTTCTGCCGTGCAGCTATCACAGCAACGTATGGCATGGACTTAGCAGGTGGGAACATCTCTTACGGCTCTACTGGTGCCAACGGTGGTAGCTGCCCAGGTACATGGCGTTCCCGTGGCTGGGCAGGTGGTGGTAACCACACATTGTTCCAGCGTGTTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d85595e4873c4dc1b2cf8283cb47d7b93d4f1756bd952d884945ebd30542158
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characteristic of a Distant Relative of Teseptimavirus Genus Phages That Acquired the Ability to Lysogenize Its Host Fijalek,A., Gizinski,R., Giermasinska-Buczek,K., Gagala,U., Gawor,J., Kropinski,A.M. and Lobocka,M. 2020 — GenBank