Protein

View in Explore
Genbank accession
QIG72885.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MTSKNTLLAGRASVPISDPYRNKIINGDFRFWQRATSQTTSDYASDDRWANTHSGSTKTHSLQTFTIGQTEVPGEPVNFSRTIVTSVANAANYVQKQQRIEDVRSLAGKRATVTFYAKADSTKNISIDLVQSFGTGGSPSSNVDFAPKKVLLSSSWQKFSYTINIPSVSGKTLGSNGDHYLGLRFWFDAGSNWNTNTVSLGQQSGTFDIARVSLVEGDATSETDPFYPRHYGQELSLCMRYFQVITVLLRAYQASGYNFSTRAQFPVPMRTTPTMTTVSSSNFDTMFSVSNVYLEPGLNSTTSAGAIYMTYTGKADAEL
Physico‐chemical
properties
protein length:319 AA
molecular weight: 35039,49880 Da
isoelectric point:9,02359
aromaticity:0,11285
hydropathy:-0,37241

Domains

Domains [InterPro]
DC_0568
STR
2–319
DC_0568
IPR008979
STR
24–216
IPR008979
G3DSA:2.60.120.260
STR
78–235
G3DSA:2.60.120.260
QIG72885.1
1 319
Architecture
STR
STR 2-319
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y65
[NCBI] 		2509785 Uroviricota > Caudoviricetes > Kleczkowskaviridae > Cuauhnahuacvirus Y65 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72885.1 [NCBI]
Genbank nucleotide accession
MN988525.1 [NCBI]
CDS location
range 172426 -> 173385
strand -
CDS
ATGACTAGTAAGAATACATTATTAGCTGGTCGAGCAAGTGTACCTATCTCAGACCCGTACAGAAATAAAATCATTAATGGTGACTTCAGATTCTGGCAACGAGCTACGTCTCAGACGACTTCAGACTATGCATCAGACGATCGATGGGCTAATACTCATTCAGGGTCAACAAAAACTCACTCACTTCAAACATTCACAATAGGTCAAACTGAAGTACCCGGTGAGCCTGTCAATTTCTCAAGAACTATTGTAACCTCAGTTGCAAATGCAGCAAATTATGTACAAAAGCAACAGAGAATTGAAGATGTCAGATCACTAGCAGGTAAAAGAGCGACTGTCACCTTTTATGCTAAGGCTGACTCAACTAAGAACATTAGTATAGACTTAGTTCAATCGTTCGGCACAGGTGGATCACCTTCATCTAATGTTGATTTTGCTCCTAAGAAAGTTCTTCTCAGTAGTAGTTGGCAGAAATTCTCATATACTATTAATATTCCATCAGTTAGTGGTAAAACTCTAGGATCAAATGGAGATCACTATCTAGGATTAAGATTCTGGTTCGATGCAGGATCAAACTGGAATACAAATACTGTCAGTCTAGGTCAACAATCAGGTACATTTGATATTGCTAGAGTATCTCTAGTCGAAGGAGATGCTACGAGCGAGACTGATCCATTCTATCCTCGACACTATGGTCAGGAATTATCTCTATGTATGAGATACTTTCAGGTCATTACTGTATTATTAAGAGCGTATCAAGCATCTGGATATAATTTCTCGACTCGTGCACAATTTCCTGTTCCGATGAGAACAACTCCAACAATGACAACAGTGAGTTCTAGTAACTTTGATACTATGTTTAGCGTCAGTAATGTTTACTTAGAGCCTGGACTTAACTCGACTACAAGTGCAGGTGCTATTTATATGACATACACTGGTAAAGCGGATGCAGAGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
999862f0fbb9d3b6ae518450375b4f9f6c20e8c81337e9fb3148d44d82a49769
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9120
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank