Protein

View in Explore
Genbank accession
AZF89927.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPTHDFVDIGDVLKNEFLEGEIVTVSPSDDTCTVNIAGSVYPALLFWHSLPTSNLRDNGAIYGAAENFVAGDSVIVMKKVNALSIGDCKVIYGGSKSKILLQKLVVYQNQNIARADNFPNDYLLYNNIIFNSENCDISWSYRQQKYIVVCPSWVKLVGMDGTVSKTYTLSNSEGYIIDHVWQWNRELWLIRTSPTTYITLDHEFNLITSGIYDFIGMRKGWWDDQVGGEESPFPMYLVESRCDMSNEHLLYVVRTANWEDIIIDQLSGQWGKWDEAESKWTFDDGSWPKDSEGNLVSESEEQEYYWCPDHKHDPYTGAQLRLYTISTMAYVVLYNFPMVDYNFVNTIEFDTCLGIEGGGGWTPPIQY
Physico‐chemical
properties
protein length:367 AA
molecular weight: 41967,54870 Da
isoelectric point:4,44551
aromaticity:0,13624
hydropathy:-0,26894

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZF89927.1
1 367
Domain Start End Length (AA) Confidence
N-terminal 1 177 177 0,3698
Central domain 178 356 180 0,7983
C-terminal 357 367 10 0,2610
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-177
Central
178-356
C-terminal
357-367

Taxonomy

  Name Taxonomy ID Lineage
Phage Methanosarcina virus MetMV
[NCBI] 		2488574 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Methanosarcina sp.
[NCBI] 		2213 cellular organisms > Archaea > Methanobacteriati > Methanobacteriota > Stenosarchaea group > Methanomicrobia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF89927.1 [NCBI]
Genbank nucleotide accession
MK170447 [NCBI]
CDS location
range 21267 -> 22370
strand +
CDS
ATGCCCACACATGATTTTGTGGATATAGGGGATGTGCTGAAAAATGAGTTTCTTGAAGGGGAAATAGTAACGGTTTCCCCTTCTGATGATACCTGTACGGTGAATATTGCAGGGAGTGTTTATCCTGCTCTCTTGTTTTGGCACAGTTTGCCCACTTCAAACTTACGCGATAATGGAGCGATTTACGGCGCAGCGGAGAATTTTGTTGCCGGTGATTCTGTTATTGTAATGAAGAAGGTCAACGCCTTGTCAATCGGCGATTGCAAAGTCATTTATGGCGGATCGAAGAGTAAAATATTACTTCAAAAACTGGTAGTTTATCAGAATCAAAATATTGCCAGGGCCGATAATTTTCCCAATGATTATTTGCTTTATAACAATATTATTTTTAATTCCGAAAACTGCGACATTTCATGGAGTTACCGACAACAGAAATATATTGTTGTCTGCCCGTCATGGGTGAAACTCGTTGGCATGGATGGCACGGTTAGCAAGACCTATACACTTTCTAATTCAGAAGGATATATTATTGACCATGTCTGGCAGTGGAACCGGGAACTCTGGCTGATAAGGACAAGTCCGACAACGTACATAACCCTTGACCATGAATTTAATCTTATTACCAGCGGAATTTATGATTTTATTGGCATGCGTAAGGGTTGGTGGGACGACCAGGTAGGAGGGGAAGAATCGCCATTTCCGATGTACCTTGTCGAGAGCCGGTGCGACATGTCCAATGAACATCTGCTGTACGTTGTGCGGACGGCCAATTGGGAAGATATTATTATAGACCAGTTATCCGGGCAGTGGGGCAAGTGGGACGAGGCCGAGAGTAAGTGGACATTTGATGATGGCTCGTGGCCGAAAGACAGCGAAGGCAACCTTGTAAGTGAATCGGAAGAACAGGAATATTATTGGTGCCCGGATCATAAACACGATCCCTACACCGGAGCGCAATTAAGATTATACACCATCTCGACAATGGCCTACGTTGTTCTCTATAACTTCCCGATGGTTGATTACAATTTTGTCAATACCATTGAATTTGATACCTGCCTGGGTATTGAAGGAGGAGGAGGGTGGACGCCGCCCATTCAATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a11d2cdeea5172b8da9e6844d4f3d396d23f1374e737682ccca3439a6c1c019
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification Of a Novel Marker Archaea Virus Characteristic For Hydrocarbon Polluted Samples Molnar,J., Magyar,B., Schneider,G.K., Kovacs,A.L., Rakhely,G. and Kovacs,T. 1993-02 — GenBank