Protein

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Genbank accession
YP_009187654.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MADTTQFEQAVDQVIEDSERLHKVVNGSAIDTVIVEDGSTIPTLRKALLDNVYFKTPPQPWVAGTQATVFNQLYSFTNSAGTFWWYAPGASPSTPITLPADPSTSTAWKVYNDSVVVSEKFAPLNTPAFVGSPTAPTPAQGSNSGAIATTAFVNLAVAAAINSLAGSSPSYAALTVVGASTLNTLVVSGTSQFGGTLDASGVLGKFQKISLSGQTATLSFDYTAASNYLKTIISPNSVQTNNLTSAVIVNGTASADNTTMSLTGVGNNTFDYVYIRGNSSKASTEPRLKVTGTTELENVRVTGSLSGVNVGVDGLDILPNSIITTTTAEIGSDLTVNGITTLGSTTIQDLGVVSSLTVDGNSTLTGGFTAGSASSVAGNLSITGLLAVTGEATVSTNLTVTGNANLNNGGTGTTTVNNLNVLGTLTGVSIDVNGKDINPNSVLATTTIEAYGSLKGASLVITGEATAPKVTANFVGTTPGSVTTPSVGTTWTPGGTGSDLTKMNNIYNVDVTNTLTIGPWANLGSAFTATIYLFQDATGGHAVTLDASYKIINGGAISTTANSVTILQVTYCGRGTVYDVAVYQRP
Physico‐chemical
properties
protein length:586 AA
molecular weight: 59674,57680 Da
isoelectric point:4,49854
aromaticity:0,06485
hydropathy:0,13191

Domains

Domains [InterPro]
DC_0194
STR
1–585
DC_0194
IPR058969
ATT
5–111
IPR058969 IPR058970
YP_009187654.1
1 586
Architecture
ATT
STR
ATT 1-111 | STR 112-585 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_KB57
[NCBI] 		1719140 Uroviricota > Caudoviricetes > Vequintavirinae > Mydovirus KB57 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009187654.1 [NCBI]
Genbank nucleotide accession
NC_028659.1 [NCBI]
CDS location
range 25576 -> 27336
strand -
CDS
ATGGCTGATACAACACAATTTGAACAGGCTGTGGATCAGGTTATCGAGGATTCTGAGCGTCTCCATAAGGTGGTCAACGGATCGGCGATCGACACTGTTATTGTAGAAGATGGTAGCACGATTCCAACATTACGTAAAGCGCTTCTTGACAATGTGTATTTTAAAACACCACCACAACCTTGGGTGGCTGGTACACAGGCGACAGTTTTTAATCAACTGTATTCCTTCACCAATTCAGCAGGGACTTTCTGGTGGTATGCCCCAGGAGCGTCACCATCTACACCTATCACTTTACCTGCCGATCCGTCCACAAGTACCGCTTGGAAAGTTTACAATGACTCCGTTGTAGTTTCTGAAAAATTTGCACCTCTTAACACACCCGCATTTGTCGGTTCTCCGACAGCGCCTACCCCTGCTCAGGGAAGTAATAGTGGTGCAATAGCGACAACTGCATTTGTCAACTTGGCTGTCGCAGCAGCGATCAATTCTCTTGCTGGGTCTTCTCCAAGTTATGCTGCTCTTACGGTGGTTGGTGCTTCAACCCTTAACACATTGGTTGTTTCTGGGACATCCCAATTTGGTGGGACGCTTGATGCCTCTGGTGTGCTTGGTAAATTCCAGAAAATTTCGTTATCTGGACAAACTGCCACTCTTTCTTTTGACTACACCGCTGCCTCTAACTATCTGAAGACTATCATATCTCCTAACTCTGTTCAAACCAATAATCTGACTTCCGCAGTTATTGTGAATGGGACAGCTAGTGCAGATAACACCACAATGTCATTAACTGGTGTCGGTAATAACACCTTCGACTATGTGTATATCCGAGGGAACTCTTCCAAGGCCTCTACGGAACCAAGACTTAAGGTAACCGGAACGACAGAACTTGAAAACGTAAGAGTAACTGGTTCATTGTCCGGTGTCAATGTGGGGGTTGATGGTTTAGACATTCTCCCCAACTCCATTATCACAACGACAACAGCCGAGATAGGTTCTGATCTGACTGTGAATGGTATAACAACTCTCGGAAGTACCACTATTCAGGATCTGGGTGTAGTAAGCTCATTAACAGTCGATGGAAACAGCACATTAACTGGAGGATTTACAGCCGGTAGTGCTAGCTCTGTTGCAGGAAATCTATCCATCACAGGCCTGCTTGCAGTTACTGGGGAAGCTACGGTAAGCACCAACCTTACAGTTACTGGAAACGCTAACCTGAATAATGGTGGGACAGGCACAACAACCGTAAACAACCTTAACGTACTTGGGACTCTGACAGGTGTCTCCATTGATGTCAACGGGAAGGACATTAACCCTAACTCCGTTCTGGCAACCACCACAATAGAGGCATACGGATCTCTAAAAGGTGCCTCCCTCGTTATTACAGGTGAAGCGACGGCTCCGAAGGTCACTGCGAATTTCGTAGGAACAACCCCCGGTTCTGTTACCACACCTTCCGTAGGGACAACTTGGACACCAGGAGGGACAGGTTCTGATCTGACGAAGATGAATAACATCTACAACGTAGATGTGACAAATACTTTAACTATCGGGCCTTGGGCAAATCTTGGTAGTGCTTTTACTGCCACGATCTATCTGTTCCAAGATGCAACTGGCGGACACGCCGTCACCCTTGATGCATCTTATAAAATCATAAATGGTGGTGCGATCAGCACTACTGCAAATTCAGTTACAATTCTACAAGTAACCTATTGTGGAAGAGGGACTGTATATGATGTAGCTGTCTATCAAAGACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a3510eaf2200f5ba359b1e41574062fbcae19d17a4fc3f033c59e1ca2d585550
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae bacteriophage vB_KpnM_KB57 Volozhantsev,N.V., Popova,A.V., Krasilnikova,V.M. and Bogun,A.G. 2017-09-14 — GenBank