Protein

View in Explore
Genbank accession
AZB66537.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,70
Protein sequence
MIHVMNFKGEIVDFIAQSDSAVIQAVHKRDINDRMETFDFTILSERTTYMQERNRIVIQDKNGQYREFIIDRISADIDGYTEVETVASYLEDITKARPYTPGKLEKMTTKQALSDVLKDTGWQVSDATEYDGLRTTSWTSYQTRYDVLLQLCTTYKMMADFYIEVGSNRVDKRLVVLRKRNPLFKGKEITYGKDLTGLKRTVDFSEIKTALLCVGPEPEEGKKGLELVVEDDEAQAKYGLPGHHNWGVYEPETEDQNMTESRLRTLGITELNKRKSEVITYEVTAVDIEKEYKHEVINLGDMVRIKNRDFTPTLYAEAEVISEEYDLISKDVTYSFGTYKEFKESDLRSSFDRKLDAIRQKVSDGLSNVNTIVRESLEGELQYFERKILKGDTPPDNPVNDLLWLDTSNPKVAVLRRYWEGEWIKSSAENAEDVGAVTREQALYSELSNTFVNLTIQHSRLMHEVSDVLESEYLIDTDIKEEVNNKLNETIGVFNTIKSNLDSMTSETATIGKLVDTQALFLQYREKLQALYNTVENAKIAIDERFKLLQSQYTDEKFNEAMEKIAAALPGGNWDAETGRLTGDIPNEARLNEIEIALQQNLTDQINGAKQILNNQVDAKLLQLKDEITLSVRSVDEKIDGLGDGVNLLDSYNSSHPLSINKDIVSTKSFQGRYYATNLYTADYLKTILIPGETYTYSYEMEIIGLSEKEAPYSKKHGIIFYSNTMDKDRIFSYKDVERSVGNKIKYTHTFVAPEITDHRFVAYAGFYTDDGTLKYPISSNLVEITKFKLERGTKATPYTESLNDRLEPIKIRTTNAENSIKVMQDSLLLTATKTDVQRTLDEQLKPLKNEVNEQKAQLQVMSDSIDSKVSQSEYTSNLQGVVERLDNAETHRQQLSNQIADRVTRSEYENDVEQRLVNSKAEVLIEAEQTSNRVSKEVFNESSKTLERYTSEFINNVSTGMSFNYDHNGNIQSANVGRDGIKLKGDRVDITVNKDFNVLVNDVSNKADETNIVNKLNLSREGLDINVNNIGIRGGRSTSYVDIRNDLIELSGEYTRTFRGDTQKDYVYTRMKDGLLRFRNNTRDRSLYYSDFGISTYVDGDANESSGTLQFFDYTYSDNARGVTLNSAAGVVALRSDNNRIILDASGTVNIESAESSVYIRPMRNSRIGNNEFRFWVKDNDNADDTDGVISFGSITTGYAAGSSIRLDKSTKTSFVYATNNNGDIGTGDFYARDLYGNLRAKTTNQYALVAYDGEFRVTDKNGATGSSINYRPIRVSEIKTTEGGAFSNHSGKNVYFGVGYNELRITANNFWNGGNPQYQDIRFKNWTAMSHEKYKYDIEEWDYNVLDVFKNELQLHCYKVNSEAATKYARIHHGIVLRDNSNLDKFPVEWRNGDGFDGNEIMFWNTKAIQELVFKVEEQNEKIKELEEQLNEQTTS
Physico‐chemical
properties
protein length:1438 AA
molecular weight: 163903,30590 Da
isoelectric point:5,00651
aromaticity:0,09249
hydropathy:-0,63540

Domains

Domains [InterPro]
DC_0109
STR
1–926
DC_0109 DC_0203
IPR007119
Unmapped
27–336
IPR007119 Coil IPR030392
Coil
Unmapped
1411–1438
Coil
AZB66537.1
1 1438
Architecture
STR
RBD
STR 1-926 | RBD 1300-1438
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiSP15-1
[NCBI] 		2491319 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZB66537.1 [NCBI]
Genbank nucleotide accession
MK075001 [NCBI]
CDS location
range 36157 -> 40473
strand +
CDS
TTGATCCACGTAATGAATTTTAAAGGTGAAATAGTTGATTTTATAGCGCAATCAGATAGTGCGGTAATTCAAGCGGTGCATAAACGCGACATTAACGATCGTATGGAAACGTTTGATTTTACGATATTGTCTGAACGCACAACTTACATGCAAGAGCGTAATCGCATCGTCATTCAAGATAAAAACGGTCAGTATCGCGAATTTATTATCGATAGAATTTCAGCAGATATTGATGGGTATACCGAAGTCGAGACGGTCGCATCGTACCTTGAAGATATAACAAAAGCGCGTCCCTACACACCAGGCAAATTAGAAAAAATGACGACTAAACAAGCGTTGTCTGATGTGTTGAAAGATACAGGTTGGCAAGTATCTGACGCTACCGAATATGACGGCCTACGAACGACTTCATGGACATCTTATCAAACACGATATGATGTGTTATTACAACTGTGTACGACGTATAAAATGATGGCAGACTTTTATATAGAAGTTGGTTCGAATCGTGTGGATAAACGTCTTGTCGTTCTAAGAAAACGCAATCCTTTATTTAAAGGGAAAGAAATAACATACGGCAAAGACTTAACAGGTTTGAAGCGTACCGTTGATTTTTCAGAAATCAAGACGGCATTGTTGTGTGTTGGTCCTGAACCCGAAGAGGGCAAAAAAGGTTTGGAACTAGTCGTTGAAGATGATGAAGCTCAAGCAAAATATGGTTTGCCTGGTCACCATAACTGGGGCGTTTACGAACCTGAAACCGAAGACCAAAATATGACAGAATCACGATTGCGGACGTTAGGTATAACAGAACTGAATAAGCGCAAGTCGGAAGTCATCACATACGAAGTGACTGCGGTTGATATTGAAAAAGAGTACAAGCACGAAGTCATAAATTTGGGAGATATGGTACGTATTAAAAACCGAGATTTTACACCAACTCTTTATGCAGAAGCTGAAGTTATATCAGAAGAATATGACTTAATCAGCAAAGATGTCACGTATAGCTTCGGTACGTATAAAGAGTTTAAAGAAAGTGACTTGAGAAGCTCATTTGACAGAAAATTAGACGCTATTCGACAAAAGGTAAGTGACGGTTTATCTAACGTCAATACAATCGTCAGGGAATCACTAGAGGGAGAACTGCAGTACTTTGAACGTAAAATTTTGAAGGGTGATACACCGCCAGATAATCCTGTAAACGATTTACTGTGGTTAGATACAAGCAATCCTAAAGTAGCTGTATTACGACGTTACTGGGAGGGTGAATGGATTAAGTCGTCAGCTGAAAATGCAGAAGATGTAGGAGCTGTTACGCGTGAACAAGCGTTGTATAGCGAGTTAAGTAATACATTCGTAAACTTAACGATTCAACATAGTAGATTGATGCACGAAGTGTCTGACGTTTTAGAATCTGAATACCTTATAGATACTGATATAAAAGAAGAAGTAAACAACAAATTAAATGAAACAATTGGCGTGTTTAACACGATTAAGTCTAATCTTGACAGTATGACTTCTGAAACAGCCACAATAGGAAAATTGGTTGATACACAAGCGTTATTTCTTCAATATCGTGAGAAATTACAAGCGCTATATAACACTGTTGAAAACGCAAAAATTGCGATTGATGAGCGTTTTAAGTTGCTACAATCACAATATACTGATGAAAAGTTTAACGAAGCGATGGAGAAAATCGCAGCCGCATTACCAGGTGGCAATTGGGACGCTGAAACTGGTCGACTAACTGGTGATATTCCAAATGAAGCAAGATTAAACGAGATTGAAATTGCTTTACAACAAAATTTGACAGACCAAATCAATGGTGCTAAACAGATTTTAAATAATCAAGTTGATGCAAAGTTGTTGCAATTAAAAGATGAAATCACTTTGTCTGTTCGTTCTGTTGATGAAAAAATTGACGGTTTAGGTGACGGTGTAAATTTGCTTGATTCATATAATTCAAGTCATCCGCTTTCTATTAACAAAGACATCGTTTCAACAAAATCTTTTCAAGGGAGATACTATGCTACAAATTTATATACCGCTGATTATCTAAAAACTATATTGATTCCTGGTGAGACATACACATACTCTTATGAAATGGAAATCATAGGACTGTCTGAAAAAGAAGCGCCATATAGTAAAAAACACGGAATTATTTTTTATAGTAATACAATGGATAAAGATAGAATTTTTTCTTATAAAGACGTTGAAAGAAGCGTAGGAAACAAAATTAAGTATACTCATACATTTGTAGCGCCAGAGATTACGGATCATAGATTCGTTGCTTACGCAGGTTTTTACACTGACGATGGTACGCTTAAATATCCAATCAGTTCAAATTTAGTAGAAATAACAAAATTTAAGCTCGAACGAGGTACAAAAGCGACACCTTATACAGAATCGCTTAACGACAGATTAGAACCTATAAAAATACGCACGACAAACGCCGAAAACAGCATCAAAGTGATGCAAGATAGTTTACTACTAACAGCAACAAAGACTGACGTACAACGCACGTTAGACGAGCAATTAAAGCCGTTAAAAAACGAAGTAAATGAGCAAAAAGCACAACTACAAGTCATGTCTGATTCGATTGACAGTAAAGTGAGTCAATCTGAATATACATCTAATTTACAAGGTGTGGTAGAACGTCTAGATAATGCTGAAACACACCGACAACAATTAAGTAATCAAATTGCGGATAGAGTGACGAGGTCTGAATACGAAAACGATGTTGAGCAAAGACTTGTTAATTCTAAAGCCGAAGTATTAATTGAAGCTGAACAAACATCGAATCGTGTTTCAAAAGAAGTGTTTAACGAAAGTAGTAAAACTTTAGAAAGATATACATCAGAATTTATCAATAACGTTTCGACCGGCATGTCTTTTAATTATGATCATAACGGTAATATACAGTCAGCGAATGTTGGACGTGATGGCATAAAATTAAAAGGTGATAGAGTAGACATTACAGTTAACAAAGACTTTAATGTGTTAGTGAATGATGTTTCTAACAAAGCTGATGAAACTAACATTGTCAATAAGTTAAATCTGTCACGCGAGGGATTAGATATTAATGTAAACAATATCGGCATTCGTGGAGGCCGCAGCACATCATATGTTGACATTAGAAACGATTTAATCGAATTAAGTGGTGAGTATACACGTACATTCAGAGGGGACACACAAAAAGATTATGTCTACACAAGAATGAAAGATGGCTTGTTAAGATTTAGAAATAACACACGCGATCGTTCTCTTTATTACTCAGATTTTGGAATATCGACGTATGTTGATGGTGATGCAAATGAATCTTCAGGGACATTACAATTTTTCGATTACACTTATAGTGATAATGCTAGAGGTGTCACTTTGAATAGTGCGGCTGGTGTTGTTGCATTACGTTCAGATAATAATCGTATAATTTTAGATGCGTCAGGTACTGTGAATATAGAAAGTGCTGAATCATCTGTTTATATCAGACCTATGCGCAATTCTAGGATTGGTAACAACGAATTTCGTTTTTGGGTAAAAGACAATGATAATGCAGATGACACAGACGGTGTTATAAGTTTTGGTTCAATAACAACAGGATATGCAGCAGGTAGTAGTATACGTCTTGATAAATCAACAAAAACAAGTTTTGTGTATGCGACTAATAATAATGGTGATATTGGTACTGGGGATTTTTATGCTCGAGATTTATATGGGAATCTAAGAGCTAAAACAACTAATCAATACGCATTAGTTGCCTATGACGGTGAGTTTCGTGTTACAGATAAAAACGGGGCAACAGGTAGCTCAATAAATTATCGACCAATAAGAGTTTCGGAAATTAAAACGACCGAGGGAGGGGCTTTTTCTAATCACAGTGGTAAAAATGTATATTTCGGCGTAGGTTATAACGAATTGCGAATAACAGCTAATAATTTTTGGAATGGCGGTAATCCACAATATCAAGATATACGATTTAAAAACTGGACAGCAATGTCGCACGAGAAATATAAATACGACATCGAAGAATGGGATTATAATGTTTTAGATGTGTTCAAAAACGAGCTTCAATTGCATTGTTATAAGGTCAATTCCGAAGCAGCCACAAAATACGCAAGAATTCACCATGGTATTGTTTTGAGGGATAATAGTAATCTAGATAAATTTCCAGTCGAATGGCGTAATGGCGATGGTTTTGACGGTAATGAAATTATGTTTTGGAACACAAAAGCGATTCAAGAGTTAGTTTTTAAAGTAGAAGAACAAAACGAAAAAATCAAAGAACTGGAGGAACAATTAAATGAACAAACTACAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57f1e4ccee87ea6a8b47c70420ee4c7caf56eb2b66697af0c92249073b9db5d5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7324
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage of Staphylococcus pseudintermedius Wipf,J.R.K., Deutsch,D.R. and Fischetti,V.A. 2014-10 — GenBank