Protein

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Genbank accession
YP_012050807.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDIQTSYEEFKTLRRTVHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWLGFDRKGNTFLLPLYSNNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEAMSYSPVIVSTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPLARITKRLDFSDVYRVEWDIIPTASSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34412,39160 Da
isoelectric point:5,05557
aromaticity:0,13378
hydropathy:-0,23378

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
YP_012050807.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012050807.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,6281
Central domain 288 288 2 0,7117
C-terminal 289 299 10 0,5494
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-288
C-terminal
289-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECOP18
[NCBI] 		2713223 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012050807.1 [NCBI]
Genbank nucleotide accession
NC_105825 [NCBI]
CDS location
range 10069 -> 10968
strand -
CDS
ATGTACTACTCTCTAATGCGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATATACAGACTTCCTACGAGGAATTCAAGACTCTTCGTAGGACTGTTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACTCCTTCTTCTATATCATTAGCAATAAATTTTAGTAATACACTTACTGAAGCTAATTTTTTCGAATGGCTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTACCACTATATAGTAACAACATTGAACCTATTATGTTTAATATCTATATAGTAAATAAAGATAATAACTGTGTATATTTTGAGAACTGCTATGTATCTACTGTAGATTTTTCTTTAGATAAGAATATACCAATTCTTAATGTTGGTATTGAATCAGGGAAATTTTCCGAGGTATCTACATATAGAGAAGCAGCTTCTATTATACAAGGTGAAGCAATGTCTTATAGCCCGGTAATAGTTTCTACTAACGGTAGCATCTTACCTGGCCTTATTTCCGCTTCTTTATCTTTTCAACAGCAATGCTCTTGGAGAGAAGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCTTATGTAAATGAAATGAATGCTTCGGCAACCATTTCTCTATACTACTTAAAACGTTTTGCTGGAGATATGGTTTACAATATCGAACCAGAGACCGATGTACCTTTAAATATAAGAAATAATAATATTTCTATAGATTTTCCTTTAGCACGTATTACAAAACGCCTAGATTTCTCAGATGTGTATAGAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCAGTGAGAATAGATTTCTTTGGAGAAATTAAAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
12d64d9a05ea6019e64bcdfc2a6e89f64efff33fcf22aad2bc60f1165dd975a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8318
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genomic study of ECOP18 phage Lee,J.-H. and Yoo,B.-E. 2023-05-12 — GenBank