Protein

View in Explore
Genbank accession
UOK17566.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 0,60
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAINQLLQFATADTNVLTQDEYSADPQRISGNIPGVARSKLVNKAARQSAFVAAMIGQYISEKSGKDVMDNGDIDALKINFIAALAASPSFTGTPTAPTAAPGTNTTQLANTAFVQTSIYQALPAGIVGYFAMSNAPFGWLKANGAAVSVAAYAALAANIYCGDALNATAIFGYRCTDPVNPTTTRSTSGAYIVLPDLRGEFPRGWDDGRGVDPGRAFGSAQQDSLQNVTGAFGTMVGAGGSITANGVFSIANQSTGVYGSGASGSGGSVNFDLSKAARTAAETRSRNVALLACIKY
Physico‐chemical
properties
protein length:297 AA
molecular weight: 30439,67720 Da
isoelectric point:7,62617
aromaticity:0,08418
hydropathy:0,03704

Domains

Domains [InterPro]
DC_1450
STR
1–254
DC_1450
SSF88874
STR
117–297
SSF88874
IPR037053
ATT
121–204
IPR037053
IPR011083
ATT
126–165
IPR011083
UOK17566.1
1 297
Architecture
STR
ATT
STR
STR 1-120 | ATT 121-204 | STR 205-297
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BaM-IFTN9
[NCBI] 		2928725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bordetella avium
[NCBI] 		521 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOK17566.1 [NCBI]
Genbank nucleotide accession
OM293958.1 [NCBI]
CDS location
range 18743 -> 19636
strand +
CDS
ATGGCAATTAATCAGCTTCTCCAGTTCGCCACTGCCGACACTAATGTGTTAACGCAGGATGAGTACAGTGCGGACCCGCAGCGCATTTCTGGCAACATCCCGGGGGTTGCTCGTTCAAAATTGGTGAATAAGGCTGCGCGGCAATCTGCCTTTGTGGCAGCAATGATCGGCCAGTATATTTCTGAAAAATCAGGCAAAGATGTCATGGATAATGGTGACATCGACGCCTTGAAGATCAACTTTATCGCCGCTCTGGCTGCCTCCCCAAGCTTTACCGGCACGCCAACCGCTCCAACCGCTGCGCCTGGGACCAATACCACTCAGCTCGCGAACACAGCGTTTGTGCAGACTTCCATTTATCAGGCATTGCCAGCTGGGATCGTAGGATATTTTGCGATGAGCAATGCACCGTTTGGCTGGCTAAAGGCTAATGGAGCGGCCGTGTCTGTTGCTGCTTATGCGGCACTCGCAGCAAATATTTACTGTGGCGACGCTCTAAACGCGACGGCGATCTTCGGGTATCGCTGCACAGACCCAGTTAACCCAACAACGACGCGCAGTACGAGCGGCGCTTATATCGTGTTGCCTGATCTTCGCGGGGAGTTCCCCCGAGGCTGGGATGACGGACGTGGCGTTGACCCGGGGCGCGCATTTGGCAGTGCGCAACAAGATTCTTTGCAAAACGTGACAGGCGCGTTTGGGACTATGGTCGGCGCTGGCGGGTCGATAACAGCCAACGGCGTTTTTTCTATCGCGAACCAATCGACAGGCGTATATGGTTCTGGCGCGTCTGGTTCCGGCGGGTCTGTAAATTTTGATTTGTCCAAAGCCGCAAGAACTGCCGCAGAGACTCGCTCTCGCAACGTCGCGCTACTCGCTTGCATCAAATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
909a6dc3b86ccb6cd05247cc3b469657afc0287bec6a121722d57ec43ff2409a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7984
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Bordetella avium bacteriophages Serian,D., Churin,Y., Kehrenberg,C. and Hammerl,J.A. 2023-06-15 — GenBank