Protein

View in Explore
Genbank accession
ANY92511.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MALSVQRATSDGTMTSIVLSIEFFDTRDIFVTLDETPAIEGTDYTWQGRTQINFTNAPLADGVEVTLTRRTNRTALRHIFSEGAEFTRANLDDAHTQLLYLSQEMTEGSGISDFYGDLDMHRYRVRNMAQGTENRDAVTFLQLKEVADRVTAIENIKGTNRRGPITISTQSPDTVPVQYEEWVMIGDVDNGAFVNSSNDKDQE
Physico‐chemical
properties
protein length:203 AA
molecular weight: 22782,88010 Da
isoelectric point:4,55146
aromaticity:0,07882
hydropathy:-0,48374

Domains

Domains [InterPro]
DC_1609
STR
1–202
DC_1609
IPR005604
ATT
4–108
IPR005604
ANY92511.1
1 203
Architecture
ATT
STR
ATT 1-108 | STR 109-202 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP48
[NCBI] 		1874018 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANY92511.1 [NCBI]
Genbank nucleotide accession
KX371615.1 [NCBI]
CDS location
range 7689 -> 8300
strand -
CDS
ATGGCATTAAGTGTACAACGTGCTACGAGCGACGGTACTATGACCAGCATCGTCCTCAGCATTGAATTCTTTGACACGCGTGACATTTTCGTTACGCTTGATGAGACACCTGCAATCGAGGGTACAGATTACACTTGGCAGGGTCGAACACAAATTAACTTTACTAACGCCCCGTTAGCTGATGGGGTGGAGGTTACGCTTACACGGCGTACCAACCGCACTGCGCTGCGTCATATCTTCTCTGAGGGTGCTGAGTTCACCCGAGCTAACTTAGACGACGCGCACACACAATTGCTGTACCTAAGTCAAGAAATGACCGAGGGTTCTGGCATTAGCGATTTCTATGGTGACTTGGATATGCACCGCTACCGAGTGCGTAACATGGCACAAGGTACGGAGAACCGAGACGCTGTAACGTTCCTCCAATTGAAAGAGGTTGCAGACCGTGTAACCGCAATTGAGAACATTAAGGGTACGAACCGCCGAGGCCCAATCACTATCTCCACTCAATCCCCTGACACCGTTCCGGTTCAGTACGAGGAATGGGTGATGATTGGTGATGTGGATAATGGCGCGTTCGTTAACTCATCTAACGATAAAGACCAAGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
518c6302eaa085a2ef82151b6a57881ddc13bf07326847a237157c2f600c5712
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8084
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Vibrio parahaemolyticus phage VP48 isolated from sea water Qiao,H., Xu,X.L., Fei,W.B., Huang,J., Cong,Y., Fu,Y.M., Zhou,S.X., Mandeville,R., Wang,W.B. and Sheng,C.J. 2019-06-06 — GenBank