Protein

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Genbank accession
AGH26376.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGDVLYTNVAPIDANSNLDLTSPNNVLYKYNSVEGGIIVPRGCSLVGTDLRRTKIIPKYVPYPTTYAAKGINTEDQVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSVETLAPKFSHHRLTCFEFADGLNPLSQLITDGTVPNTDYSAVPNILERTDLEIYYQKVSKAFATIPDTSGDPAADQIQPRVEENRIVGPISDEYRVLQVTRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSEVDAGLYNGSFTVTSASGNVFTYQMQGEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHANGAKATGFKSMVVAQFTGLSLQKDDRAFVRYNQSTGNYDVATAGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYQGHFTALSGGDMSITNSNSNFGNTALRSAGFKAKSFSKDKAGAITHIIPPKALNVISTIASGSNGTNTITLASAKVGDALGIIQGMVVSGTNIPAGTTVGTVNTNTGAITLSSTLTGNISAGNIIFGEETSVNWVNIDIQRTKVVNASLAGQGGTPGTRLYLYGYTTEASPPTTRVQGFTVGARQDGTGNTAIADKINCLLVANGATTATVQSASISPYGPSVSGLAAGVAGSPIQYDSSTYTINGVAGSVGGWYLNVSANSEIYQTLSTNTQYNNVNFTPSTFLKRIPDPRDLQDRTYRVRLVIDKDKSNPLPRDPISGFVLQPLNSDTTTFNLQKCFYIYDIEIVQAFERGVNDGIYYLTLLCGSISPSTSNFDDRKFSQNVNEVYPTFDRDNPVADPLAAVSVADNVTIGLVNATDGANPTPAKDPKRSITKEGIQFLLTDTGWTQPGTTPNYDSNNEKLSNVQLTARAGDEETRKIKIRENNDGTVAPINVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLTQEQIRFSQSIKEEGGVSFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEENTTIQTFSELVLTDKLTVLGGASNQLESIFAGPVTFQGLSTFTNNIQARKISYYNQDGTVIKQTLLAPSLANGQPDFSNITNYDTPADGDLVYNINWTPGKSLGWIYYGGAWKEFGLTDTGEINIDTFNNTQHIGIGTAAVSGFRVGILGNAKVDGDLVVTGRGGVGADKYITKTYTGDGTTLTFAVTTYSGGIKHSDDSLLVFLNGVAQIAGTNYTVDANGANVVFSSGDAPLASDTVHILELPI
Physico‐chemical
properties
protein length:1322 AA
molecular weight: 141784,56930 Da
isoelectric point:4,95132
aromaticity:0,09228
hydropathy:-0,23116

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH26376.1
1 1322
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,9647
Central domain 87 311 226 0,9527
C-terminal 312 1322 1010 0,1121
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-86
Central
87-311
C-terminal
312-1322

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM1
[NCBI] 		536444 Uroviricota > Caudoviricetes > Pantevenvirales > Emcearvirus > Emcearvirus gerard
Host Prochlorococcus marinus str. MIT 9303
[NCBI] 		59922 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
6c19ab537507a5221c8a3d820f4466e1d58949cc2bd74ab131c9a00ecce92f1d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3646
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50