Protein

View in Explore
Genbank accession
YP_007675461.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MLYRIQSTALGQSGNTLLILPNATITVRDANGDLARLYADPDEITEIPNPTLSDAAGGYDFYVEYGDYYDITVALNGQSVDDRVYPIDMGLGARVDAAAATATEQAGIATTKAGESNASAVTSQAWAESATAPGDPGTKSAKTWAGEAAGDATAAAGSAAKAELFDGPKFNTIALMALYEDAKAGDVATVLSAFNGGVEHFDWIEGVA
Physico‐chemical
properties
protein length:208 AA
molecular weight: 21380,19310 Da
isoelectric point:4,05594
aromaticity:0,08173
hydropathy:-0,07308

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage pCB2047-A
[NCBI] 		754045 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sulfitobacter sp. CB2047
[NCBI] 		1525218 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Sulfitobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007675461.1 [NCBI]
Genbank nucleotide accession
NC_020858.2 [NCBI]
CDS location
range 35220 -> 35846
strand -
CDS
ATGCTGTACCGCATTCAATCCACTGCCCTCGGGCAGTCTGGGAACACGTTGCTGATCCTGCCAAACGCCACAATCACCGTGCGCGATGCCAACGGGGATCTGGCGCGCCTCTACGCTGACCCAGACGAAATCACGGAAATCCCAAACCCGACGCTTTCGGATGCCGCCGGCGGCTATGACTTCTATGTTGAGTATGGCGATTACTACGATATCACGGTCGCGCTGAACGGGCAGTCTGTTGATGACCGCGTTTACCCGATCGATATGGGGCTCGGGGCCCGCGTCGACGCAGCGGCGGCAACAGCGACGGAACAAGCGGGCATTGCAACGACGAAGGCGGGGGAATCCAACGCCAGCGCCGTCACTTCGCAAGCATGGGCGGAATCCGCCACAGCCCCCGGCGATCCCGGCACCAAGAGCGCCAAGACGTGGGCGGGCGAGGCGGCAGGCGACGCAACAGCAGCGGCGGGAAGCGCGGCCAAGGCTGAGCTATTCGACGGGCCGAAGTTCAACACCATCGCGCTCATGGCGCTGTATGAGGACGCAAAGGCGGGCGACGTTGCCACGGTTCTCAGCGCATTTAACGGCGGCGTTGAGCATTTCGACTGGATCGAGGGGGTAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
745d973a5f9342c84256f3fdd98f6f36f71704463e61cbfdec300218e61bb8fe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8500
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Sulfitobacter phage pCB2047-A Henn,M.R., Buchan,A., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank