Protein

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UniProt accession
F1D0V6 [UniProt]
Protein name
Uncharacterized protein 25
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MTITLSEVRGGFNTSTINSNFEKIGEALNSNVLSVKNGSNQMEQELDMNSNRLINLPAPINPTEPLRLEDLKTLEGDVSGIVPTVIRHTGDGVTFDFDSGTKVVAGPFSTKVYLNGIRLFPEVDYTTVGTKVRFINYVPTSTDKVDIYSYAPLEVVGPAGPAGPEGPQGPTGEQGPQGIQGQQGIQGPQGPQGVVGPTPIHQFGDGITQPTTSIRFANKIDPDTGVVIEWGPWVNIQGPQGVVGPAGPQGLSPEHEWDGPNLRFRNPDGTWGNYEDLTGPQGPTGATGPVGPKGDKGDSLFINAQGLFSGLSAYDDEVPPFIYFATDYSFDSTFQEQDFVGDGSTKSFTLLFTPNLKSNLYVWQGNSYQSLDTFEVAGNVLTFDEAPKTGVRITVRLQSPFVTKGAIFSKLSAASGDWSPAIPFGQGPQGPQGEQGPIGPTGPQGARGPQGEKGVQGDQGPQGIQGPQGERGPQGEKGPQGDRGLTGPQGPQGPQGIIGPQGPVGPTGAQGPIGPQGPEGPRGPMGPQGPTGDKGPQGDQGQRGSREWYIETTGTSWSQALINAINPNPVVYDVGIQYNKSQGYSESRVYRGSGVWEQVELVQGFTIKVMNGVSATKLNIGSATALSSTTFGGTDTPLNQARSFSVRLGVISTPFATSAMVSLEDLQVLLASFSPSFLADVQMTWSIRVNGSVVYESSRRAYVSANNTTYYGFSGGTWAFTIPSPREGNTIEVILNGYVTSPGTNFKLSRVTTTGSQFSVVSLKA
Physico‐chemical
properties
protein length:765 AA
molecular weight: 80618,32210 Da
isoelectric point:4,78155
aromaticity:0,08627
hydropathy:-0,40902

Domains

Domains [InterPro]
DC_1431
STR
5–390
DC_1431 IPR050149 DC_0898
IPR008160
STR
157–196
IPR008160 DC_2298
IPR008160
STR
427–484
IPR008160
DC_0978
STR
464–512
DC_0978
F1D0V6
1 765
Architecture
STR
RBD
STR 5-512 | RBD 546-765
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ICP2
[NCBI] 		979533 Uroviricota > Caudoviricetes > Zobellviridae > Icepovirus bengalense >
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADX87707.1 [NCBI]
Genbank nucleotide accession
HQ641345 [NCBI]
CDS location
range 23791 -> 26088
strand -
CDS
ATGACTATTACTCTTAGTGAAGTAAGAGGAGGCTTTAACACCTCCACAATTAACTCCAACTTTGAGAAGATTGGAGAGGCTCTAAACTCCAATGTTCTCTCAGTTAAGAATGGTTCCAATCAAATGGAACAAGAGTTGGATATGAACTCCAACCGTCTAATTAACCTACCTGCTCCAATTAACCCTACCGAACCTCTTCGACTGGAAGACCTTAAAACCTTAGAAGGTGATGTATCTGGTATTGTTCCAACAGTGATTCGACATACTGGTGATGGAGTTACTTTTGACTTCGACAGCGGTACTAAGGTAGTTGCAGGTCCTTTCTCTACCAAAGTGTATCTAAACGGTATCCGTCTATTTCCAGAAGTGGATTACACTACAGTGGGCACAAAGGTACGATTCATTAACTACGTCCCAACGTCTACAGACAAGGTGGACATTTACTCATATGCTCCACTTGAAGTAGTTGGTCCGGCAGGCCCGGCAGGCCCAGAGGGTCCGCAAGGCCCTACTGGAGAACAAGGTCCACAGGGTATTCAAGGACAACAAGGTATTCAGGGTCCGCAGGGACCACAAGGCGTAGTAGGTCCTACTCCAATCCACCAATTTGGTGACGGCATTACTCAACCTACCACATCAATTAGATTCGCCAACAAGATTGACCCAGATACTGGTGTAGTTATTGAGTGGGGTCCTTGGGTAAACATTCAAGGTCCGCAGGGCGTAGTTGGTCCTGCAGGCCCACAAGGTTTATCTCCAGAGCATGAATGGGATGGTCCAAACCTACGATTCCGCAATCCAGATGGTACGTGGGGTAACTACGAAGACCTAACGGGTCCCCAAGGCCCTACCGGTGCTACTGGTCCAGTTGGCCCGAAAGGTGATAAGGGCGACTCTCTGTTCATCAATGCTCAAGGTTTGTTTAGTGGTCTGAGTGCATACGATGATGAAGTTCCACCATTTATCTACTTTGCAACAGACTATTCATTTGACTCTACATTCCAAGAACAGGACTTTGTTGGAGATGGCTCTACTAAGAGTTTCACTTTGTTGTTCACTCCAAACTTGAAGAGTAACCTATATGTTTGGCAAGGCAACTCATACCAGTCCCTAGATACTTTTGAGGTAGCTGGTAACGTTCTAACGTTTGATGAAGCTCCTAAAACTGGAGTCCGCATCACAGTACGTCTCCAGTCTCCATTTGTGACTAAGGGTGCTATCTTTAGTAAGTTGAGCGCAGCGTCTGGTGATTGGTCTCCAGCTATTCCGTTTGGTCAAGGTCCACAAGGACCTCAAGGTGAGCAAGGACCCATCGGCCCTACAGGTCCACAAGGTGCTCGCGGTCCGCAAGGCGAGAAGGGTGTGCAAGGCGACCAAGGGCCTCAAGGTATCCAAGGTCCCCAAGGGGAACGTGGCCCACAGGGTGAGAAAGGCCCTCAAGGGGATAGGGGTTTAACAGGCCCACAAGGGCCACAGGGTCCTCAAGGTATTATTGGTCCGCAAGGTCCAGTAGGACCAACAGGTGCTCAAGGCCCAATCGGGCCACAAGGGCCGGAAGGCCCACGAGGTCCAATGGGACCACAGGGTCCAACAGGTGACAAAGGTCCACAAGGGGACCAAGGTCAACGTGGTTCTCGTGAGTGGTATATTGAAACCACAGGCACTAGTTGGAGCCAAGCATTGATTAACGCTATTAACCCAAACCCTGTTGTGTATGATGTTGGTATCCAGTACAACAAATCTCAAGGGTATTCAGAATCTCGCGTGTATCGTGGTTCTGGAGTGTGGGAACAGGTGGAATTGGTTCAAGGTTTCACAATCAAAGTGATGAATGGTGTAAGTGCTACCAAGTTAAACATTGGGTCAGCTACTGCACTGTCAAGTACAACGTTTGGTGGAACAGATACTCCACTTAACCAAGCACGGTCATTTAGTGTTCGTCTCGGAGTGATTAGTACCCCGTTTGCGACTTCTGCAATGGTGAGTTTGGAGGATTTACAAGTCTTGTTGGCCTCGTTTAGTCCATCATTCTTGGCTGATGTTCAAATGACTTGGAGTATTCGAGTAAACGGTTCCGTAGTGTATGAGTCTTCCAGACGTGCTTATGTTAGCGCAAATAACACAACTTATTATGGTTTTTCTGGAGGCACTTGGGCGTTTACTATTCCTTCTCCTAGAGAGGGGAACACTATAGAAGTTATCCTGAATGGATACGTAACTTCTCCGGGAACTAACTTCAAACTAAGCAGAGTAACCACTACTGGTTCTCAATTTAGTGTAGTATCTTTGAAAGCATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
ef5fee3a62773dfa47e2ebfe262d5ebd2dc405f35275a7551fb5220f7c477292
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6222
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50