Protein

View in Explore
Genbank accession
AUR81658.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARATLTELINRITQDIQENTSGNITATLLNELLDYLTNNLYLPTDATVTVNTVSGVKSFTFGNGLTVTVDGVAGTAEISVTDNTPVIIFGEMNITTNEANTVTFGSGQTTSDDTLLPITAGTTYFEVPGYAGGIQDGLVYDAGNGGLRATVAGTYHFDGWLSCRHSVNNSTVGVVFGIKRGGVIIGTSPRPTPAEMPNADDIGLISGTGLVVLAVDDVVVPLIATQNIGVVTINNSTLVGKLIKAS
Physico‐chemical
properties
protein length:247 AA
molecular weight: 25598,46000 Da
isoelectric point:4,28631
aromaticity:0,05668
hydropathy:0,22996

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.012.O._10N.261.48.C12
[NCBI] 		1881290 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR81658.1 [NCBI]
Genbank nucleotide accession
MG592397.1 [NCBI]
CDS location
range 3706 -> 4449
strand +
CDS
ATGGCACGCGCAACGCTTACGGAACTTATTAACCGTATCACTCAAGACATTCAGGAAAACACGTCAGGTAATATCACCGCGACGCTGTTAAACGAACTCCTAGACTACCTCACGAATAACCTATACTTACCAACTGACGCAACCGTTACGGTTAACACTGTCTCGGGTGTTAAATCCTTCACATTCGGTAACGGACTTACCGTTACGGTCGACGGTGTAGCTGGTACGGCTGAAATTAGCGTAACGGACAACACGCCTGTGATCATATTCGGTGAAATGAACATCACGACTAACGAAGCGAATACCGTAACGTTTGGCTCAGGTCAGACGACCTCGGACGATACCCTTCTTCCAATCACTGCGGGTACGACTTACTTCGAGGTTCCAGGCTACGCGGGCGGCATCCAAGACGGTTTAGTGTATGACGCCGGTAACGGTGGTCTACGCGCTACGGTTGCGGGTACTTATCATTTCGATGGTTGGTTGTCATGTCGCCACAGTGTGAACAACTCGACAGTAGGTGTCGTATTCGGTATCAAACGCGGCGGTGTTATCATCGGTACGTCTCCTCGCCCTACACCCGCTGAAATGCCTAACGCTGACGATATCGGTCTGATTAGCGGTACGGGTCTCGTCGTATTAGCAGTTGACGACGTTGTAGTGCCTCTTATCGCAACGCAGAACATAGGGGTCGTTACGATTAATAATTCGACACTAGTTGGTAAGTTGATCAAAGCGTCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
48ef8056ac0757bcfe6b7541a577af886852cf74065bab0708f28d8bbdd75171
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank