Protein

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Genbank accession
YP_009276421.1 [GenBank]
Protein name
head decoration
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAIPFVNDIDLRGNEIQDFRVPRLNGLPTATAAQNGYVVYNTQDDRFYVCRSAAWMQLPQNLTSLEGTTKASLLDRTNHTGSQSSSTISDFHAAVIASRLDEFAAPTTAVSMGTQRITNLATGTGAADAVTKAQLDAVAAVANAAASGIAIKNAVRAVAKTNITLTGAQTIDGVAVVAGDRVLVAGQTSAAANGIYLAAAGAWSRTTDADETGELAPGTLVAVREGTTEADTLWGLVSDAAITVGTTNQTWTRMVAGSTGEIITAGNGLTKTGNTLSVLPKASGGITVDGTGIAVDSTIARTASGTVPAGSTNATITHNLGTDSAQITIWEASTGKQVMVEIAKSGANAVVATFKTAPTVGQYSFSARS
Physico‐chemical
properties
protein length:369 AA
molecular weight: 37525,39310 Da
isoelectric point:5,25433
aromaticity:0,04607
hydropathy:0,07913

Domains

Domains [InterPro]
DC_1609
STR
1–369
DC_1609
IPR011049
STR
97–138
IPR011049
YP_009276421.1
1 369
Architecture
STR
STR 1-369
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009276421.1
1 369
Domain Start End Length (AA) Confidence
N-terminal 1 277 277 0,8758
Central domain 278 358 82 0,0619
C-terminal 359 369 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-277
Central
278-358
C-terminal
359-369

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GMA4
[NCBI] 		1647471 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Gordonia malaquae
[NCBI] 		410332 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009276421.1 [NCBI]
Genbank nucleotide accession
NC_030939 [NCBI]
CDS location
range 42724 -> 43833
strand +
CDS
ATGGCCATTCCCTTCGTCAACGACATCGACCTCCGCGGCAACGAGATCCAGGACTTCCGCGTCCCCCGACTCAACGGCCTCCCGACCGCGACTGCAGCCCAGAATGGTTACGTCGTTTACAACACCCAGGACGACCGTTTCTACGTGTGCCGGTCCGCCGCGTGGATGCAGCTGCCGCAGAACCTCACGTCCCTTGAAGGCACCACGAAGGCGTCGCTCCTCGACCGCACGAACCACACCGGTTCGCAGTCGTCCTCGACGATCAGCGACTTCCACGCCGCCGTCATCGCGAGCCGACTCGACGAGTTCGCCGCGCCCACCACCGCCGTGTCGATGGGCACCCAGCGCATCACCAACCTCGCGACGGGCACCGGTGCCGCCGACGCCGTCACCAAGGCACAGCTCGACGCCGTCGCAGCAGTCGCCAACGCAGCCGCATCCGGCATCGCCATCAAGAACGCCGTCCGCGCCGTCGCCAAGACCAACATCACCCTCACCGGAGCGCAGACCATCGACGGTGTCGCCGTCGTCGCAGGCGACCGCGTCCTCGTCGCAGGACAAACCAGCGCCGCAGCCAACGGCATCTACCTCGCCGCCGCCGGAGCATGGTCCCGCACCACCGACGCCGACGAGACCGGCGAACTCGCACCCGGCACCCTCGTCGCCGTCCGCGAAGGCACCACCGAAGCCGACACCCTCTGGGGCCTCGTCTCCGACGCCGCGATCACCGTCGGCACCACCAACCAGACCTGGACCCGCATGGTCGCCGGATCCACCGGCGAAATCATCACCGCAGGCAACGGCCTCACCAAGACCGGCAACACCCTCTCCGTGCTCCCCAAGGCCAGCGGCGGCATCACAGTCGACGGCACCGGCATCGCCGTCGACTCCACCATCGCCCGCACCGCATCAGGCACCGTCCCCGCAGGCTCGACCAACGCCACGATCACCCACAACCTCGGCACCGACTCCGCCCAGATCACCATCTGGGAAGCCTCCACCGGCAAGCAAGTCATGGTCGAGATCGCCAAGTCTGGTGCCAACGCTGTCGTCGCCACGTTCAAGACCGCACCGACTGTTGGGCAGTACTCCTTCTCCGCCCGCAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
031b422b509735006b7d9fd9fee73036de2b04ec73c17676fbc8afed3f78507a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8536
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50