Protein

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Genbank accession
WBF05215.1 [GenBank]
Protein name
tail fiber protein 1
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MGLKLTNNGASKLASSVTADETTIAVLPGDGAKFPALAAGDWFPATLIKVDGSSEIVKVNARAIDSFTVERAQEGTAALNFNAGDRFELRATSAALLDLQKHSPTTTPAKANLDDTVNLRALYQILDLLEPVGTVKYWDSDDPPPPGYFVCNGKNGTPDWTDLFIVGAGRSYARRATGGANTVQLSPEQMPIHNHGLHDPGHNHGLHDPGHNHYLNDPGHDHDIPTASGDGYIGRINLNGGSAGSQRTGGRGTGIWLNGSGTGMWLDGSGTGIWLDNAGGGQAHENRPPYVALPIIRKMVTALSTLG
Physico‐chemical
properties
protein length:307 AA
molecular weight: 32283,45600 Da
isoelectric point:5,78981
aromaticity:0,06515
hydropathy:-0,36221

Domains

Domains [InterPro]
DC_0891
STR
1–306
DC_0891
SSF88874
STR
130–295
SSF88874
cd22641
STR
131–204
cd22641
WBF05215.1
1 307
Architecture
STR
STR 1-306 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage CSP3
[NCBI] 		3017166 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia contaminans
[NCBI] 		488447 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF05215.1 [NCBI]
Genbank nucleotide accession
OQ053201.1 [NCBI]
CDS location
range 17400 -> 18323
strand +
CDS
ATGGGCCTGAAACTGACCAACAACGGCGCGAGCAAGCTGGCGTCATCAGTGACGGCGGACGAGACGACTATCGCCGTTCTCCCCGGCGATGGCGCGAAGTTTCCTGCGCTCGCCGCGGGCGACTGGTTCCCGGCGACGCTCATCAAGGTCGACGGCTCATCAGAGATCGTCAAGGTGAACGCGCGAGCGATCGACTCATTCACGGTCGAACGCGCTCAAGAGGGTACGGCGGCCCTCAACTTCAACGCAGGTGATCGCTTCGAGCTCCGCGCCACGTCCGCCGCGCTGCTCGACCTGCAAAAGCACTCGCCGACCACCACGCCGGCCAAGGCGAACCTCGACGATACGGTCAATCTCCGCGCGCTATACCAGATTCTCGACCTGCTCGAGCCGGTCGGAACGGTGAAGTATTGGGACAGCGACGATCCGCCGCCGCCCGGCTACTTCGTCTGCAACGGCAAGAACGGCACGCCCGACTGGACCGACCTCTTCATCGTCGGTGCCGGCCGCAGCTACGCGCGTCGCGCGACCGGTGGCGCGAACACCGTGCAGCTCTCTCCCGAGCAGATGCCGATCCACAATCACGGGCTGCACGACCCCGGCCACAATCACGGCCTGCACGATCCCGGCCACAACCACTACCTCAACGACCCCGGCCACGATCACGACATTCCTACCGCGTCCGGCGACGGCTACATCGGCCGCATCAACCTGAACGGTGGCTCGGCCGGAAGCCAGAGAACCGGCGGGCGCGGCACGGGCATCTGGTTGAACGGGTCCGGCACCGGCATGTGGCTCGACGGCTCCGGCACCGGCATCTGGCTCGACAACGCGGGCGGCGGACAGGCGCACGAGAACCGCCCTCCCTACGTCGCACTCCCGATCATCCGCAAGATGGTCACTGCTCTCAGCACTCTGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88cf5de29e45fa562b718642b5a9d907f0f63c71e535c7098022134e151e1ac0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7753
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Burkholderia contaminans bacteriophage CSP3 requires O-antigen polysaccharide for infection Stanton,C., Batinovic,S. and Petrovski,S. 2023-06-15 — GenBank