Protein

View in Explore
Genbank accession
YP_009847092.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MSVESNVNFIPELNDQFPRKNDLIKEGDDHIRLVKKVLKNTLPGFNKALTITADSMNNFDKNIGFETDTVILKGAMRVDGSINVNGKKLTGLATPTADGDAVSWKFIKDLTTSIYNVTWPINSIYFTVDDRNPSVILGFGTWEKFGQGRVPIGTGTGVDGRSESKTFVNNGTGGMYSTVLTIDNLPQHTHQLNLDTVAGGDHKHDGGVAIRASSSQPFGKAAAHDELFSYEHHKYGEDVGTAWTNTVPGHTHKVQGNTVGTGGGIGFNTQNPYIGVSMWKRTA
Physico‐chemical
properties
protein length:283 AA
molecular weight: 30667,86600 Da
isoelectric point:6,54674
aromaticity:0,08481
hydropathy:-0,42721

Domains

Domains [InterPro]
DC_0570
ATT
1–64
DC_0570 IPR053827
YP_009847092.1
1 283
Architecture
ATT
ATT
ATT 1-64 | ATT 115-282 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009847092.1
1 283
Domain Start End Length (AA) Confidence
N-terminal 1 109 109 0,9867
Central domain 110 272 164 0,0022
C-terminal 273 283 10 0,9975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-109
Central
110-272
C-terminal
273-283

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 4_4572
[NCBI] 		2588517 Uroviricota > Caudoviricetes > Grimontviridae > Lahexavirus lv44572 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009847092.1 [NCBI]
Genbank nucleotide accession
NC_048773 [NCBI]
CDS location
range 42840 -> 43691
strand -
CDS
ATGTCAGTAGAAAGTAATGTAAATTTTATACCAGAGCTGAATGATCAGTTCCCTCGAAAAAATGACTTGATCAAAGAGGGTGATGATCATATCAGGTTAGTTAAAAAAGTTCTGAAGAATACACTCCCAGGTTTTAACAAAGCTTTAACAATAACAGCAGACTCAATGAATAACTTCGATAAGAATATTGGATTTGAAACTGATACTGTTATCCTGAAAGGGGCTATGCGTGTAGACGGTTCTATAAACGTTAACGGTAAAAAGTTAACTGGATTAGCCACTCCAACTGCGGATGGTGATGCGGTTTCATGGAAGTTTATTAAAGATTTAACAACCTCTATTTATAATGTAACATGGCCTATCAATTCAATCTATTTCACTGTAGATGATCGAAACCCCTCCGTGATTCTTGGATTTGGTACTTGGGAGAAGTTTGGACAAGGTAGAGTCCCCATCGGTACTGGAACTGGTGTGGATGGTCGTAGCGAGTCTAAGACATTTGTAAATAATGGTACAGGTGGTATGTACTCAACTGTTCTAACTATTGACAACTTACCTCAGCATACTCACCAGTTGAATTTAGATACAGTAGCTGGTGGTGATCACAAGCACGATGGTGGCGTTGCAATAAGGGCTTCATCTTCACAACCTTTTGGAAAAGCGGCCGCCCATGACGAGTTATTCTCATATGAACATCACAAATATGGTGAGGATGTTGGAACTGCTTGGACAAACACTGTTCCAGGTCATACCCACAAAGTCCAAGGTAATACTGTTGGAACTGGTGGTGGTATTGGTTTCAATACACAAAATCCATATATCGGTGTCAGTATGTGGAAAAGAACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eeb614cc19ac7269eff13d76df4d997a1d8f0c82b6d2430374e8b1839ada28b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7081
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nine Novel Phages from a Plateau Lake in Southwest China Provide Insights into Aeromonas Phage Diversity Xiao,W., Bai,M., Wang,Y. and Cui,X. 2019-07-05 — GenBank