Protein

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Genbank accession
YP_010302211.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MNYKLFANSAVPQLTRLFAQTTADDKSCYLVKLNAGYTEADINKCLNFQAATGAGYVFDAALAASSGICTVLAKGTNCVRTIDRNKLSISDCLLTATAEGVPTNLILGGILPICLTVGTDVTLLYPDLNIKFDPNGYKTQITILAFSISLTQMWTETTGVTGLTGTEVIAFDTGSFNTGAFTDYTGLAFTTSNVKIMADGSGFDLGTNGIISTPSVPNFDCSKSFTIECDYHQSGNADYAEWSPLRIGTGLTDRLSIAFDRSNEKGLLIWNNANQSSTPAKVVRPISPYAALWSGSVVHFKYVYDASTNTHTVFLDGTQVDQFVYAIQKPVSTTVQQVNGGYGASANAAYTPIINNYRLRQGA
Physico‐chemical
properties
protein length:363 AA
molecular weight: 38880,32610 Da
isoelectric point:5,20380
aromaticity:0,10193
hydropathy:0,03802

Domains

Domains [InterPro]
DC_0447
STR
1–180
DC_0447 IPR013320
YP_010302211.1
1 363
Architecture
STR
STR
STR 1-180 | STR 206-349 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010302211.1
1 363
Domain Start End Length (AA) Confidence
N-terminal 1 117 117 0,0022
Central domain 118 316 200 0,1970
C-terminal 317 363 46 0,9924
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-117
Central
118-316
C-terminal
317-363

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_1
[NCBI] 		2869543 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010302211.1 [NCBI]
Genbank nucleotide accession
NC_061448 [NCBI]
CDS location
range 55191 -> 56282
strand -
CDS
ATGAACTATAAGTTATTCGCAAACTCTGCTGTGCCTCAGTTGACGCGCCTGTTTGCTCAGACTACAGCGGACGATAAGTCATGCTATCTGGTGAAGCTCAATGCTGGTTACACCGAAGCAGACATTAACAAGTGCCTGAACTTTCAGGCGGCTACTGGTGCTGGGTATGTGTTCGATGCTGCTCTCGCTGCGTCAAGTGGTATCTGTACCGTGCTTGCTAAAGGCACTAACTGCGTTCGCACTATCGACCGTAATAAGCTGTCTATCTCTGACTGTTTGCTTACTGCAACCGCAGAGGGTGTTCCAACCAATCTGATTCTCGGTGGCATCCTGCCTATCTGTCTGACTGTGGGCACTGACGTTACTCTGCTCTATCCTGACCTGAACATTAAGTTCGACCCGAACGGCTACAAGACGCAGATTACCATTCTCGCGTTCTCTATTAGCCTGACGCAGATGTGGACTGAGACTACAGGCGTTACTGGTTTGACAGGCACAGAAGTAATAGCGTTCGATACAGGTAGCTTCAACACTGGTGCGTTCACTGACTACACCGGTCTTGCATTCACTACCTCGAATGTCAAAATCATGGCCGACGGTTCAGGCTTCGACTTGGGTACTAACGGTATCATCTCTACCCCATCTGTACCGAACTTCGATTGCAGCAAGTCGTTCACTATCGAGTGTGATTATCACCAGTCAGGTAACGCTGACTATGCTGAATGGTCGCCGCTTCGAATTGGCACAGGTCTGACAGACCGACTGTCTATTGCATTCGACCGCTCTAACGAGAAGGGTCTGTTGATTTGGAACAACGCAAACCAGAGCAGTACGCCTGCAAAGGTTGTTCGTCCCATCTCACCGTATGCCGCTCTATGGTCCGGCAGTGTCGTTCACTTCAAATATGTGTACGATGCGTCCACCAACACGCACACAGTCTTCCTCGATGGAACGCAAGTGGATCAGTTTGTCTACGCAATTCAGAAACCTGTGTCTACGACCGTACAGCAGGTGAATGGTGGTTATGGTGCGAGTGCAAATGCAGCGTACACTCCTATCATCAACAACTATCGTCTGAGACAAGGAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce22de84976bde79d775a97f0782d3f2d120eb2978d8ef4dfab06fda860bb1cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5708
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_1 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank