Protein

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Genbank accession
AAN08381.1 [GenBank]
Protein name
gp19
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSTKFKTVITTAGAAKLAAATMPGGKKINLNVMAVGDGGGKLPVPDAGQTQLVNEVWRHTLNKISQDNRYSNYIVAELVIPPEVGGFWMRELGLYDDEGTLIAVANMAESYKPELAEGSGRAQTCRMVIIVSSVESVALSIDSTMVMATQDYVDDRLAEHEKSRRHPDATLKEKGFTQLSNATDSESETLAATPKAVKTAYDLANAKYTAQDATTTRKGIVQLSNATDSVSETLAATPKAVKVAYDLANAKYTAQDATTARKGIIQLSNATDSTSETLAATPKAVKAAMDNANGRLAKNSNGGDIPDKDLFVRRIGAARAFDGAVTIGGDANPWTTAEFIAWLESCGAFNHPYWMCKGAWDYTGNKVITDTGCGNICLAGAVVEVMGAGGAITIRVTTPTTTSGGGIASAQFTYINHGDGYAPGWRRDFNTINKPTPEDVGALSVNGGRLNGPLGIGTDNALGGNSIVLGDNDTGFKWHSDGVLGIYANNALVGYIDNYGLHMSVDVLSNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRSGGAIYQNNGDIFGSLWGNGWLSTWIHNNVVKAVRLGPVALSGGLWRDFQLGGGQVVTGFHTDGRWEMEGGDDKVYYRPIQYLVGDTWVTAPSV
Physico‐chemical
properties
protein length:675 AA
molecular weight: 71666,25640 Da
isoelectric point:5,41479
aromaticity:0,07704
hydropathy:-0,23259

Domains

Domains [InterPro]
IPR051934
Unmapped
1–201
IPR051934 IPR005068 IPR005068 DC_0128
IPR022225
ATT
1–151
IPR022225 IPR005068 DC_1371 G3DSA:6.20.70.20 DC_2105
DC_1371
STR
1–251
DC_1371
AAN08381.1
1 675
Architecture
ATT
STR
RBD
ATT 1-151 | STR 152-410 | RBD 449-675
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAN08381.1
1 675
Domain Start End Length (AA) Confidence
N-terminal 1 453 453 0,6487
Central domain 454 652 200 0,3605
C-terminal 653 675 22 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-453
Central
454-652
C-terminal
653-675

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PSP3
[NCBI] 		2907836 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAN08381.1 [NCBI]
Genbank nucleotide accession
AY135486 [NCBI]
CDS location
range 12166 -> 14193
strand +
CDS
ATGAGCACGAAATTTAAAACCGTTATCACCACTGCCGGAGCCGCTAAGCTTGCTGCGGCCACCATGCCGGGCGGTAAGAAAATAAATCTTAACGTTATGGCTGTTGGTGACGGCGGTGGAAAACTGCCGGTGCCTGATGCCGGTCAGACGCAGCTTGTTAATGAGGTCTGGCGTCACACTCTGAATAAAATCAGCCAGGACAACCGGTACAGTAATTACATTGTGGCCGAGCTGGTTATTCCGCCGGAGGTGGGCGGCTTCTGGATGCGTGAGCTTGGCCTTTATGACGATGAAGGGACGCTGATTGCTGTCGCCAATATGGCCGAAAGCTACAAGCCAGAACTGGCTGAGGGCTCGGGGCGTGCACAGACATGCCGCATGGTCATTATTGTCAGCAGTGTCGAGTCTGTGGCGCTGTCCATTGACTCAACGATGGTGATGGCGACGCAGGATTATGTCGACGACAGGCTCGCCGAACATGAAAAATCCCGTCGTCATCCTGATGCCACTCTTAAAGAAAAAGGGTTTACTCAGCTCAGTAACGCGACAGACAGCGAGTCTGAAACGCTCGCAGCGACGCCGAAAGCTGTCAAGACAGCGTATGACCTTGCTAATGCGAAATATACAGCTCAGGACGCCACCACAACGCGTAAAGGCATTGTGCAACTCAGCAATGCCACTGACAGTGTGTCTGAGACGCTTGCCGCGACACCGAAAGCGGTCAAGGTGGCATATGACCTTGCTAACGCGAAATATACAGCTCAGGACGCCACTACAGCGCGTAAAGGGATTATCCAGCTCAGCAATGCCACTGACAGCACGTCTGAGACGCTGGCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGATAATGCGAACGGGCGGCTGGCGAAAAACAGTAATGGCGGCGATATTCCTGACAAGGATTTGTTTGTACGTCGTATCGGTGCCGCGCGAGCGTTTGATGGCGCGGTGACTATCGGCGGTGATGCTAATCCGTGGACTACGGCGGAGTTTATCGCCTGGCTGGAGAGTTGCGGCGCATTCAATCACCCGTACTGGATGTGTAAAGGGGCGTGGGATTATACAGGTAACAAAGTCATCACAGATACAGGGTGCGGTAATATCTGTCTCGCTGGCGCTGTGGTGGAGGTTATGGGGGCTGGCGGTGCGATTACCATTCGGGTGACAACGCCCACCACAACATCAGGTGGTGGAATTGCCAGTGCTCAGTTTACCTATATCAATCACGGCGATGGATATGCTCCGGGATGGCGACGCGATTTCAACACCATAAATAAACCCACTCCCGAAGATGTAGGGGCGTTGTCAGTTAATGGAGGACGGCTTAACGGTCCGTTAGGCATTGGTACAGACAATGCACTGGGTGGTAATTCGATTGTATTAGGCGATAACGATACAGGGTTTAAGTGGCACAGTGACGGTGTTCTGGGTATTTATGCCAATAATGCTCTGGTCGGTTATATCGACAATTACGGGCTGCACATGTCAGTAGATGTTCTCTCTAATGGTGCCGTACGCGCAGGCAACGCAAAAAAACTGTCACTGACGAGCAATAATAATTCGACAATGACAGCCACGTTTAATTTATGGGGCGACGCAAACAGGCCAACAGTTATTGAACTGGACGACGATCAGGGGTGGCATCTGTACAGCCAGCGAAATCCTGATGGTTCGATTGTCTTTACGGTTAATGGAGATATCACCGCTAATACACTTCGTTCAGGTGGAGCCATCTATCAGAATAACGGCGACATCTTTGGTTCGTTGTGGGGAAATGGCTGGTTAAGTACATGGATTCACAACAATGTAGTAAAAGCGGTCAGACTTGGCCCCGTGGCGCTTTCTGGCGGTCTGTGGCGTGATTTTCAGCTTGGCGGCGGACAGGTGGTGACGGGGTTCCATACTGACGGTCGCTGGGAAATGGAAGGTGGTGATGACAAGGTTTATTACCGTCCCATTCAGTATCTGGTTGGTGATACGTGGGTGACAGCCCCAAGTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8485f036abca3a7ae74290276b46229db372eee02f00e260018de42a35b48e6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete DNA Sequence of the P2-related Salmonella Phage PSP3 Christie,G.E., Xu,P. and Buck,G.A. 1991 — GenBank