Protein

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Genbank accession
XNS40473.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,96
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNANSIFHSDMPFVLVDGIYEAALGNAGNGFFVTQMPSDIINIKSNDPGRVILTAVEINGTHRAFLNGTQTQVGQFSAFFQDIARAGSNIALSSAFASGSSLAHGTYSYNSSLGHEESIARQGTGGTMFQAASFQIYRPSGVSVGEAITKTWEFAGFPAGSSSVPIDANNANYWHPNWQAPIGAGGRGHNWFYVCNSNIRGFAGSAPNDQPSNTTRLHYLSQYVWVCRGSTSNMANQSGRKVIVQDGFNITPTKVTWYVLNLRYSNGNMSVTGNPFTGSDIIITPSNFTIKGVSLPNTGYRFINQNAFGNLGYRPDMEYVGNNVAYTGVFGDNTARCEIVGSNNGSLWSPVNYGGSKSQISIYRFSAGKQWYVNSNNNSIGNEHGVVWGPSSVPLRLLPNNVASTYIGDDITPSYPGTGDKYVALSTIGLGLPNANATVILTTEVIMGNLNTAGGPIRTYNNSAWQVQGRKQHSYTGGDGIFHQILTLPPNHLVPFHTTASYSYTQQWASEPDNLTFRRSGFIYTIKNLGNGNAELGVVMHATESAAVFLPRIRVTVQRLT
Physico‐chemical
properties
protein length:591 AA
molecular weight: 63748,02070 Da
isoelectric point:8,72923
aromaticity:0,11337
hydropathy:-0,24941

Domains

Domains [InterPro]
IPR059609
RBD
1–591
IPR059609
XNS40473.1
1 591
Architecture
RBD
RBD 1-591
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNS40473.1
1 591
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,0011
Central domain 272 470 200 0,1409
C-terminal 471 591 120 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-470
C-terminal
471-591

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KookSpook
[NCBI] 		3233701 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS40473.1 [NCBI]
Genbank nucleotide accession
PP925842 [NCBI]
CDS location
range 108442 -> 110217
strand -
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATCGTCACTATAGTCCAAATGCCAATAGTATTTTTCATAGTGATATGCCTTTTGTCCTGGTTGATGGTATTTATGAGGCTGCATTAGGTAATGCTGGAAATGGGTTTTTTGTTACCCAAATGCCTTCTGACATAATAAATATTAAATCTAATGATCCTGGTAGAGTTATACTAACTGCTGTTGAAATTAATGGTACTCATAGAGCTTTTCTTAACGGTACTCAAACTCAAGTAGGACAGTTCTCAGCATTTTTTCAGGATATAGCTAGGGCTGGTTCTAATATTGCCCTTTCTTCTGCTTTTGCCTCTGGTTCTAGTTTAGCACACGGCACATATAGTTATAACTCTAGTCTAGGACATGAAGAGTCCATAGCTAGACAGGGGACTGGGGGTACTATGTTTCAAGCCGCCTCTTTTCAGATTTATAGGCCTAGTGGGGTATCAGTAGGTGAGGCTATTACTAAAACTTGGGAATTTGCAGGATTTCCTGCTGGATCCTCAAGTGTGCCTATAGACGCTAATAACGCTAATTATTGGCATCCTAACTGGCAGGCTCCTATAGGGGCAGGTGGTAGAGGACATAACTGGTTTTACGTCTGTAATTCCAATATTAGAGGTTTTGCCGGGTCTGCTCCTAATGATCAACCTAGTAATACTACTAGGTTACACTATCTCTCTCAATATGTATGGGTCTGTAGAGGCTCTACTTCTAATATGGCTAATCAAAGTGGTAGAAAAGTAATTGTACAGGATGGATTTAACATTACCCCCACCAAGGTTACCTGGTATGTATTAAATCTTAGGTATTCTAACGGTAATATGAGTGTTACTGGTAATCCCTTTACTGGATCTGACATTATTATAACTCCTTCCAACTTTACAATAAAAGGGGTTAGTCTTCCAAATACTGGTTATAGGTTTATTAATCAGAATGCTTTTGGTAACTTAGGATATCGGCCCGACATGGAGTACGTAGGTAATAATGTTGCATACACTGGAGTTTTTGGGGATAATACAGCGAGATGCGAAATTGTAGGGTCTAATAATGGATCTCTATGGTCTCCCGTAAATTACGGAGGTTCTAAATCCCAGATAAGCATCTATAGATTCTCCGCAGGTAAACAGTGGTACGTTAATTCTAATAATAATTCTATAGGCAATGAACACGGGGTTGTTTGGGGACCTTCTTCAGTACCCTTACGATTATTACCAAATAATGTAGCGAGTACATATATAGGAGATGATATAACTCCATCTTACCCAGGCACAGGTGACAAATACGTAGCACTATCTACTATAGGACTAGGATTACCCAATGCAAATGCTACAGTAATATTAACTACTGAAGTAATCATGGGTAATCTTAATACAGCTGGAGGACCAATACGTACTTATAATAACTCGGCATGGCAGGTACAGGGGAGAAAACAACACAGTTATACTGGAGGAGATGGAATATTTCATCAAATACTAACTCTACCACCTAATCATCTAGTACCCTTCCATACTACAGCTTCTTATAGCTATACGCAGCAATGGGCTAGTGAACCAGATAACTTAACATTTCGCAGAAGTGGATTTATCTATACTATTAAAAATCTGGGTAATGGTAATGCTGAACTTGGTGTAGTTATGCATGCAACTGAATCTGCCGCTGTCTTTTTACCTAGAATAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
df0f4af17d9d824a4d0c5ce7473c2622402a2a56094f7429c6083776ed44e28d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2491
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50