Protein

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Genbank accession
UYE96859.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASKVSVGKTAPVPLGQQPAANSLPVVFAEDQQPIPVEEQNLVKSEVALSLLGIPRSEVALGIFADVNTYDVNPTEWATIPLDPTLNSNGVATDGVEHIPEEAGARLVSSNGKTTILTSKRFFRYQPGRVSASTMGVKMNLTGTETDAMKGAPSIKKWGIFDKFDGYYFEVANSGEGNNFRCVRRTQAVIPQQPSGYGTNGGWLANPLAGSADVTFHTNTNFGEVGVDPIIIRDGLIYVAAAINDPSLVYSPADVRAIDNASSPENELKNKNFNSDYAVRLAYDDGTDWQEHMENRKFMFPFDQDTVEPLTPEDTSVSRGYIRADAHCNFYQIISNFNRKGSNNSFPQDFTSLQGVSDFWSGSGYDYSDGDYWETGAQSTLTNNSKKKIWHLLVNIQGAGAAGGTAGTRISSGEFTNANNALPTNVRSRTDGAQRGNVTLKEWYNLCVPKPYRMVYEWRPVRAMFSGDKLDGQTRVVRQSDINTAATDSFTGSGDGINRPGEKIDLANGTPFETTSAYNIDFTKVTMWKTEFSWYGAVGALFLCYVPIENGEARWVRVHHIRASNQHAVASLGNATLPITYLSHGSTQGTQPDEGNTLTKYGASYYIDGGDKGTVRLLSKASDYRREVAPGFVNLLGGSNLANGGYTRSGSDAFLTIKAGSGMTDVDARYGFDKDTAIGLMGAYIEGDITSKVKWITQDVSGDIKLYFENGIPGSGANANIKLIVPRAQQSLMSLRAKDFIVNREGQGVRNRLQIYPIKLGAGCSGGTTGDVINLRTVKNPLKIVSNVGSLGTTHIYGGSGATATVKEVGGTNDVVNTGRSTAAVEVEWNTGTNPSAYLADGKYTYGYFLGTTSASQAIPSNGVFTDTDITQTSWFPVLGRLYREGSDYYFSKYYSYPEEVRIAGSFLPERHLQVTEYPATYANTGWEMFTEIANSTLQGHTDYGDQTKWDKLDTSSTSSFVTWEEITRLSGVRVGQDLKLTPVANTGVEVLSYYANAGGYQFDLQDYFAYNKEYLSFPLTDEVDIINVYGHYNINSEPTLTNINPFYVNTAVTWEEQ
Physico‐chemical
properties
protein length:1058 AA
molecular weight: 115455,57090 Da
isoelectric point:5,13173
aromaticity:0,10775
hydropathy:-0,39234

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE96859.1
1 1058
Domain Start End Length (AA) Confidence
N-terminal 1 263 263 0,3280
Central domain 264 473 211 0,5359
C-terminal 474 1058 584 0,3995
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-263
Central
264-473
C-terminal
474-1058

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM66
[NCBI] 		2969442 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CC9605
[NCBI] 		110662 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE96859.1 [NCBI]
Genbank nucleotide accession
OP053360 [NCBI]
CDS location
range 85347 -> 88523
strand +
CDS
ATGGCTTCAAAAGTATCCGTAGGAAAAACTGCCCCGGTGCCCTTGGGGCAACAACCAGCGGCTAATTCGCTGCCTGTTGTTTTTGCAGAAGACCAGCAGCCAATACCCGTTGAAGAACAAAATTTAGTTAAGTCAGAAGTTGCGCTTTCATTGCTAGGTATTCCTAGATCTGAAGTTGCGCTAGGTATTTTTGCAGACGTTAATACTTACGACGTAAACCCAACAGAGTGGGCCACTATACCCCTAGATCCTACCTTAAATAGCAATGGCGTTGCTACAGATGGCGTAGAGCATATTCCAGAAGAAGCCGGAGCAAGGTTAGTTTCTTCTAACGGTAAAACTACAATTTTAACCTCAAAGCGTTTCTTCCGCTACCAACCAGGTAGAGTTTCGGCTTCTACCATGGGTGTGAAAATGAACCTCACTGGTACTGAAACAGACGCGATGAAGGGCGCACCTTCTATCAAGAAGTGGGGAATTTTTGATAAGTTTGACGGATATTATTTTGAAGTAGCAAACAGTGGGGAGGGGAATAACTTTAGATGCGTAAGAAGAACTCAAGCAGTTATTCCTCAACAGCCCTCTGGTTATGGAACAAACGGAGGATGGTTAGCTAACCCTCTTGCAGGTAGCGCCGATGTAACATTCCACACCAACACCAACTTTGGCGAAGTAGGAGTAGATCCGATAATCATTAGAGATGGTCTTATTTATGTAGCCGCAGCCATCAATGATCCTAGCCTCGTTTACTCTCCTGCTGATGTAAGAGCTATTGATAACGCTTCATCTCCAGAAAACGAATTAAAAAATAAGAACTTTAACTCTGACTACGCTGTAAGATTGGCTTACGACGACGGCACAGATTGGCAAGAGCACATGGAGAACAGAAAGTTTATGTTCCCATTTGACCAAGATACCGTTGAGCCTTTAACTCCAGAAGATACCTCTGTTTCTAGAGGGTATATCAGAGCTGATGCCCACTGTAACTTCTATCAGATAATCTCTAATTTTAATAGAAAAGGAAGTAATAATTCTTTCCCACAAGATTTTACTAGTCTTCAGGGAGTTTCTGATTTCTGGAGTGGTTCGGGTTATGATTATAGCGACGGAGACTATTGGGAGACTGGAGCACAAAGCACATTAACAAACAATTCCAAGAAAAAGATTTGGCACCTTTTAGTTAACATTCAGGGCGCAGGAGCTGCGGGTGGTACTGCTGGTACTAGAATTTCTAGTGGTGAATTTACAAATGCCAATAACGCTCTTCCTACAAACGTAAGAAGTAGAACAGACGGAGCTCAGCGCGGTAACGTAACTCTAAAAGAATGGTATAACCTTTGTGTTCCTAAGCCCTATCGCATGGTCTACGAGTGGCGACCAGTTAGAGCAATGTTCTCTGGCGATAAACTCGATGGGCAAACCAGAGTAGTTAGACAGAGCGATATTAACACTGCAGCAACTGACTCTTTCACTGGAAGCGGTGATGGCATTAATCGCCCAGGAGAAAAGATCGATTTAGCAAACGGAACTCCATTTGAAACAACTTCCGCTTACAACATTGACTTTACAAAGGTCACCATGTGGAAGACAGAATTCTCTTGGTATGGTGCTGTTGGTGCTTTATTCCTTTGCTACGTACCTATCGAAAATGGCGAAGCAAGATGGGTAAGAGTACACCACATCAGAGCTTCTAACCAACATGCAGTGGCGTCTCTTGGCAACGCAACTCTGCCAATTACATATTTATCTCACGGCTCAACACAGGGTACCCAACCTGATGAAGGTAATACCTTAACTAAGTACGGTGCTTCCTACTATATTGATGGCGGAGACAAAGGAACCGTAAGACTACTTTCTAAGGCTTCTGATTATCGTCGCGAAGTAGCTCCTGGATTTGTAAATCTTCTCGGAGGATCAAATCTTGCAAACGGAGGTTATACAAGATCTGGTTCAGATGCGTTTCTAACAATCAAAGCAGGAAGCGGCATGACGGATGTTGATGCAAGATATGGCTTTGATAAAGACACCGCAATTGGCCTTATGGGCGCTTACATTGAAGGAGACATTACTTCAAAGGTTAAGTGGATAACTCAAGATGTCAGCGGTGATATTAAGCTATATTTTGAGAACGGAATCCCAGGTAGTGGAGCCAACGCAAACATAAAATTAATTGTACCTAGAGCTCAACAATCTCTAATGAGTTTAAGAGCAAAAGACTTCATTGTTAATAGAGAAGGTCAAGGTGTAAGAAACAGACTTCAGATCTATCCTATTAAACTTGGTGCTGGATGCTCTGGTGGAACAACTGGAGATGTTATTAATCTTCGTACAGTTAAGAACCCTCTTAAGATTGTAAGCAATGTTGGTTCTCTTGGAACTACTCATATTTACGGAGGGTCTGGGGCTACTGCAACTGTAAAAGAAGTTGGTGGAACTAATGACGTTGTAAATACTGGAAGATCTACCGCGGCCGTAGAAGTTGAATGGAACACCGGTACTAATCCTAGTGCTTATTTAGCTGATGGAAAATACACATATGGCTACTTCTTAGGTACTACATCTGCAAGCCAGGCAATACCATCAAATGGCGTTTTTACCGACACCGACATTACCCAAACTTCTTGGTTCCCTGTTCTTGGAAGACTTTATAGAGAAGGAAGCGATTATTACTTCTCCAAGTATTACTCTTATCCAGAAGAAGTAAGAATTGCCGGATCTTTCTTACCCGAAAGGCATCTTCAGGTTACTGAATATCCTGCAACATATGCCAATACTGGCTGGGAAATGTTTACAGAAATTGCAAACTCAACTCTTCAAGGACATACAGACTACGGAGATCAAACCAAGTGGGATAAACTAGATACCTCTAGTACTTCTTCTTTTGTAACCTGGGAAGAAATTACCCGCTTATCTGGGGTAAGAGTTGGTCAAGATTTAAAATTAACCCCTGTTGCAAATACAGGTGTTGAGGTTCTTTCTTACTACGCCAACGCCGGCGGATATCAATTCGACCTCCAAGATTATTTTGCGTACAACAAAGAATATCTTTCTTTCCCTCTAACAGACGAAGTTGATATCATTAACGTCTACGGACATTATAATATTAACTCCGAACCAACCCTAACTAATATCAATCCATTTTATGTAAACACTGCCGTTACCTGGGAGGAACAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
62bbc08556a41b3f7c2744b4748cb866c092981f131234adcf2d560c8a9c0d13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2408
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank