Protein

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Genbank accession
QPI13862.1 [GenBank]
Protein name
hinge connector of long tail fiber, proxima
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAFIDNTKRMAYFDEDSFTTQNMSENNAVKYRLRLKGSNNNSTSTSPAVFINNTSQLRFAPGRGLTVVIFDSNMQYVAEKTFDTFGDTTNACNSCMIYMDSFGPGFIVAIVSRDAIRSTAAFDEFLSKKGSKSWPGTAMLSRFYRSSAVILYNTTQQQILAEGYQLTVAPNGDTSVTMDFVYDTIDDLGATGLTQFAVSDPNEYDVDNYNGPVFVEQPLTELNLAKGNILLCSYDLFTPKSVWDAGGKSRLSVNYLKGTTWVSGDAKMSTKPDTWERFEFYTTIPSSDINTLQVKAFRYPSSVTAGVVKVKNVSVSKALRADKTTGNAAIGVYGARMNKAAEIPMPPAGSRKARLLNLVVKDNPSKVFDLESTNFKEFQ
Physico‐chemical
properties
protein length:379 AA
molecular weight: 41796,60660 Da
isoelectric point:7,55051
aromaticity:0,11082
hydropathy:-0,27573

Domains

Domains [InterPro]
DC_0912
STR
2–379
DC_0912
PS52031
LEC
27–197
PS52031
QPI13862.1
1 379
Architecture
STR
STR 2-379
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI13862.1
1 379
Domain Start End Length (AA) Confidence
N-terminal 1 53 53 0,1270
Central domain 54 252 200 0,3025
C-terminal 253 379 126 0,7746
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-53
Central
54-252
C-terminal
253-379

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage 4S
[NCBI] 		2787015 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI13862.1 [NCBI]
Genbank nucleotide accession
MW082584 [NCBI]
CDS location
range 63165 -> 64304
strand -
CDS
ATGGCATTCATAGACAATACTAAAAGAATGGCATATTTTGATGAAGATTCATTTACAACTCAGAATATGTCAGAAAACAACGCAGTAAAATATAGATTGCGTTTAAAAGGTTCAAATAACAATAGCACAAGCACTTCTCCAGCTGTGTTCATTAACAACACATCTCAGCTTAGATTCGCTCCAGGCCGTGGATTAACAGTTGTTATATTCGATTCAAATATGCAATATGTAGCTGAGAAAACGTTTGACACATTTGGTGACACTACTAATGCTTGTAATAGTTGCATGATCTACATGGATTCATTTGGTCCTGGTTTTATCGTTGCTATTGTCAGTAGAGACGCTATTAGATCAACTGCTGCATTTGATGAGTTCTTGTCTAAAAAAGGATCAAAATCCTGGCCAGGAACAGCTATGCTTAGCCGTTTCTATCGTTCATCTGCTGTTATTTTGTACAACACTACGCAACAACAGATTTTAGCCGAAGGCTATCAATTAACTGTAGCTCCTAATGGTGATACTAGTGTCACAATGGATTTTGTTTATGATACCATTGACGACTTAGGCGCTACAGGGTTAACTCAGTTCGCGGTGAGCGATCCTAATGAATACGATGTTGATAACTATAACGGACCAGTTTTTGTTGAGCAGCCGCTCACAGAGCTTAACCTGGCTAAAGGAAATATACTACTCTGTTCCTATGATCTTTTTACTCCTAAAAGCGTTTGGGATGCAGGCGGTAAATCAAGGTTATCAGTCAATTATCTAAAAGGAACTACTTGGGTTTCAGGTGATGCCAAAATGAGTACCAAACCTGATACGTGGGAACGGTTTGAATTCTATACCACTATCCCAAGCAGCGATATCAATACTTTACAAGTGAAAGCATTTAGATATCCTAGCTCTGTTACGGCAGGTGTAGTTAAGGTTAAAAACGTGTCAGTTTCTAAAGCGTTAAGAGCAGACAAAACTACCGGAAACGCTGCTATTGGTGTGTATGGTGCTCGTATGAATAAAGCGGCAGAAATACCTATGCCTCCTGCTGGTTCTAGAAAAGCAAGACTCTTGAACTTGGTTGTCAAAGATAATCCAAGCAAGGTCTTTGATCTTGAAAGTACTAACTTTAAAGAGTTCCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac911f0c322f45a13fe998e06d1297ea12e837c6fa3b74b93593c225f9d244dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50