Protein

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Genbank accession
XOD30079.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTDSINANVVVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHIPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAVYDAHGSQQFNFPNVLKYDPDQLRQEITSTGDGKGADMIPLTQGGTIQNAVFAVTPQAYGATCDGVADDSDAVEEMMAAYPNHLIITIPPGSVLTIKRKLVYGGRRFEIRGYSGDMTNKVIGAESSQLYCDVPGDYAIQCENSDVFLSDVIVKGIPQYGNGTIGTNKGISTLNGNIKTNRTSWLGFDVPCQGINSFYVTFIDTDWLAIKNGPDIQRAYNIKFIGGRSVDFDTFFKISGAAGNGPINFIAMAFERWTNYVVGTDSAALIRPQNIAFKFCYFENMDDQSIYNGLTGRGGAATPGDAFYKKYAYARILVGTPTSFSMDETNTVYAKGLENGCIAIDSWGIRDLVFKPKIVTPADSWNSNQRPLSMVRATYLDHVDVFNNNTSPDGDLGFPFISSDNSTLLPTIRSGVGVSHGKTVLFNGFYNQTITFQDVPAGVNVYQDITTTEKLDMVNASVKITSRSAASAIATTQLQVLSSNKIRVHITNGHSNPVTFSVAIVIPYLFK
Physico‐chemical
properties
protein length:601 AA
molecular weight: 65350,89590 Da
isoelectric point:5,44605
aromaticity:0,10316
hydropathy:-0,11065

Domains

Domains [InterPro]
G3DSA:2.170.14.10:FF:000001
Unmapped
3–111
G3DSA:2.170.14.10:FF:000001 DC_2190
IPR036730
ATT
3–112
IPR036730
IPR009093
ATT
4–114
IPR009093
IPR009093
ATT
4–100
IPR009093
IPR036730
ATT
8–110
IPR036730
XOD30079.1
1 601
Architecture
ATT
STR
ATT 3-114 | STR 126-590 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD30079.1
1 601
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,9927
Central domain 162 501 341 0,9766
C-terminal 502 601 99 0,9697
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-501
C-terminal
502-601

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC.P3
[NCBI] 		3390898 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD30079.1 [NCBI]
Genbank nucleotide accession
PQ657771.1 [NCBI]
CDS location
range 10550 -> 12355
strand -
CDS
ATGACAGATTCAATAAATGCCAATGTTGTAGTGAGTATGCCTTCGCAACTCTTCACTATGGCGCGTTCTTTTAAAGCCGTAGCTAATGGCAAAATTTATATCGGTAAAATTGACACTGACCCGGTAAATCCTGAAAACCAGATTCAGGTTTATGTAGAGAACGAAGACGGTTCTCACATTCCTGTTTCGCAACCAATAATCATTAACGCTGCCGGATATCCGGTATATAACGGACAGATTGCCAAATTCGTTACCGTGCAAGGCCATTCTATGGCTGTTTATGATGCGCATGGTTCGCAGCAGTTCAATTTTCCCAATGTGCTGAAGTATGATCCTGATCAGCTTCGCCAGGAAATAACATCGACTGGAGATGGAAAGGGGGCTGACATGATACCCCTAACACAAGGAGGAACAATTCAGAATGCTGTGTTCGCAGTAACACCTCAGGCTTATGGCGCAACATGCGATGGTGTGGCTGATGACTCAGATGCTGTTGAAGAAATGATGGCAGCCTATCCAAATCATTTGATTATTACAATCCCACCTGGTTCAGTGCTTACAATTAAACGAAAGCTCGTATATGGAGGTAGGCGCTTTGAGATTCGTGGATATTCTGGCGATATGACTAATAAGGTTATAGGAGCGGAGTCAAGTCAATTATATTGTGACGTTCCTGGGGACTATGCTATTCAATGCGAAAATTCGGATGTTTTTTTATCTGATGTCATTGTAAAGGGAATTCCACAGTATGGAAACGGTACTATCGGTACGAATAAAGGAATATCGACATTAAATGGTAATATTAAAACAAACCGCACTTCTTGGCTTGGGTTTGACGTTCCATGTCAAGGTATCAATTCTTTTTACGTAACATTTATAGATACAGATTGGCTTGCAATTAAAAATGGCCCAGATATACAGCGGGCATATAACATTAAGTTTATAGGCGGAAGATCTGTTGATTTTGATACATTTTTCAAAATATCAGGCGCTGCTGGTAATGGTCCGATTAATTTTATTGCCATGGCGTTTGAACGGTGGACGAATTACGTTGTTGGTACTGATTCTGCTGCACTTATTCGACCGCAAAATATAGCGTTTAAATTTTGTTACTTTGAAAATATGGATGACCAATCTATTTATAACGGTCTTACTGGGCGGGGCGGTGCTGCAACTCCAGGTGATGCATTTTATAAAAAGTATGCTTATGCCCGCATACTGGTCGGTACGCCAACGTCTTTCAGCATGGACGAAACTAACACTGTATATGCTAAAGGGCTTGAAAACGGATGTATAGCAATTGATTCTTGGGGTATACGAGATCTTGTGTTCAAGCCTAAAATTGTTACTCCAGCAGACTCATGGAATAGTAACCAGAGGCCATTAAGCATGGTTAGGGCAACCTATCTTGACCATGTCGATGTTTTTAATAATAACACCTCACCAGATGGTGACTTAGGGTTTCCATTTATATCATCTGATAACTCTACACTGTTACCAACAATAAGATCAGGCGTTGGTGTATCCCATGGGAAAACAGTATTGTTTAATGGTTTCTACAATCAGACTATAACATTCCAAGATGTTCCAGCAGGTGTCAATGTATATCAAGATATAACAACAACAGAAAAGTTAGACATGGTAAATGCAAGTGTTAAGATAACATCAAGAAGTGCAGCTTCTGCTATTGCCACAACTCAATTGCAGGTGTTATCTTCAAATAAAATTCGCGTACACATAACAAATGGTCACAGTAACCCTGTAACATTTTCTGTGGCAATTGTAATTCCATATTTATTCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b95606a1531ae89456944139697951384eb2e33a96bf038470402053d4dbe5c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50