Protein

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Genbank accession
QIG65998.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MVDLIKITDLPHYSGNVDNVARVIVEINGTTYTIDAGQLPFIQGVPGPKGDVGSSIKILGRYNDVSELPTLGAEGDAFVIGIDLYVWIQNEAAWVNVGQFKGDKGDKGDKGDTGFGLASGGETGWLIKKASNTDFDTVWVPDNTIKNNVASQTITGAITVSDTLTIGNGATITGGLNLTGPFSFNGISITNTSFGALTIHANGDISTGNTTLSAELIRIDGKTLPAGGNTGHALVKTSTQNDYQAEFRQLVVADVANLEFRLSTIESVGLANVAVPATPNTIVKRTADGSVNANTLTLGAKVTNYVPTGATNAKYWENSYTATQAIWTARADLEGQGTNWLEVTRTGYAIQSIKFTLPNSNNVTINNNMVYHTGNFNPDDIISQALALSIALG
Physico‐chemical
properties
protein length:393 AA
molecular weight: 41376,60570 Da
isoelectric point:4,73829
aromaticity:0,07379
hydropathy:-0,07277

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65998.1 [NCBI]
Genbank nucleotide accession
MT028491.1 [NCBI]
CDS location
range 191643 -> 192824
strand +
CDS
ATGGTTGATCTAATTAAAATTACCGATCTACCTCACTATAGCGGCAATGTAGATAATGTTGCGCGTGTTATTGTTGAGATAAACGGAACAACATATACAATCGATGCTGGCCAATTGCCTTTTATTCAGGGTGTTCCCGGTCCTAAAGGTGATGTTGGTTCATCGATCAAAATCTTAGGACGTTATAACGATGTATCAGAGCTACCGACTTTAGGTGCCGAAGGTGATGCATTCGTTATTGGAATTGACCTTTACGTATGGATTCAGAATGAAGCTGCATGGGTAAACGTTGGCCAGTTTAAGGGTGATAAAGGCGATAAAGGCGATAAGGGTGATACCGGTTTTGGTCTTGCTTCTGGTGGTGAAACTGGTTGGCTGATTAAGAAAGCTTCCAATACCGATTTTGATACGGTTTGGGTGCCGGATAATACGATTAAGAACAATGTTGCGTCTCAAACCATTACGGGCGCTATCACTGTTTCTGATACGCTTACGATTGGCAATGGGGCTACTATAACCGGCGGATTAAATCTAACCGGTCCATTCTCATTCAACGGTATATCAATCACCAATACGTCATTTGGCGCTCTTACAATCCATGCCAATGGTGATATTTCGACAGGAAACACAACTCTTTCCGCTGAATTGATTAGAATTGATGGAAAGACGTTGCCAGCCGGTGGAAACACTGGACACGCTCTTGTCAAGACATCTACCCAAAATGACTATCAAGCAGAATTTAGACAGCTTGTCGTTGCTGATGTTGCCAATCTTGAATTTCGTCTATCGACTATTGAAAGTGTTGGCTTGGCAAATGTTGCCGTTCCTGCAACTCCTAACACAATCGTTAAGAGAACTGCCGATGGATCGGTAAACGCCAATACACTCACATTAGGAGCGAAGGTTACAAATTACGTTCCTACAGGCGCAACAAACGCCAAATATTGGGAAAACTCATATACAGCTACACAAGCAATCTGGACGGCTAGAGCCGATCTTGAAGGACAAGGAACGAATTGGTTGGAAGTAACTAGAACTGGTTATGCAATTCAGTCAATTAAATTTACTCTTCCTAATTCAAATAATGTCACCATAAATAATAATATGGTCTATCATACTGGTAATTTTAATCCAGATGACATTATTTCACAAGCACTAGCCTTATCGATTGCACTAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c93e1e609980dd3faffbdabc77286c6eb06a2731ccde42b0b5434182067dc42
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6687
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank