Protein

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Genbank accession
GENB_a54daa23c8db [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MTCSNKPNYTPFELTGLAPTKQWGLGRSAGYERFNPEEFHALEDSVKITFPVDFRGKVKGNLVPNPSNAVGHNDQMYPENILKGSKYLSKPSMLFNGAVFNESTLYNGAIIATTQEYNQGLMFYWEDFLRPAKRIKAGDQVTFSVDVRSTGEDIPTNAVAFKATSNFEDYYHVIEQPITKEFTRITFTTRFLSEDWEWDEAFGMFWGTENPAVTDYPSFLYNRDKLAGFIQAEESIQLEFARPMVSVIGATEYIEAGEDFFSANKWDWKKALSKSYLDEHTGKYATDGKAASNYAMKDFLPIKDGASYINFYKRTTVTEPPSPINAYGKILFYSAANEESYMNQYKLFPRESSVYGGYAARIEVPDGASHYRVMVTSEKGKASAEVAVQPSNDNWTEFRQEWYDAIANKLDGNVARAETNYRTEPLAMQFNIDLKSAVEKVLPKVFDDLSTDAEKQQRLRGIADVFTTSVTARSITQGVGGLDLCFWRWLPDGSKAQQVLQQLKGNGLTTVVHPSTYQEWINPKGEVVSFVKSNKLVVNELYSGGNTIKGYVDSIMDTVVLEINGELTDIKAEVSRDASTFVFNNVGGKFTEKDNVRVVGYLAKESGKKDYAKLFWATKPEDVAEFNTLPFMEVDHVVMTASITVTQSQLTEWGFNPNLQDYRVESLERPISTTEEYMFGSMVQITHAYDVYGYVESNFPEFFGDCYTFDDRIRKINERIKEFNLVATPIDTDEFPVGSREVLASAEARNPDRDYLIKTELGQTVEMTINNSKGHFIHSNGYIYVGFARKTPSDRESSMALDSSLSFSFLMDRQYDSLPRVFRYNYQKQPWFLFVRNINRSVLAPKVNSLTPINGGTRRYNFGASEDARYISMDCFIKAPAEEDMPKLMEELADFLDVGETVIQFSDNKDRYYKVMLDGSTDLSQTLHVGTLTLTFVMLENTAVGKQVVETVEIDSTEGSVPFIELNNMGTADAYPTYQLTFDEPAGYVDLVGTDTSANVSIGRRPKDTNDETKVDLRPRKFYSKFTTTDGAGWMNMNDTQLPNFEGVSAKLQGSVQRANGIGNQDKWNYGDTNHKGHHGAGIIANLQKNVDDFYLEASVVATGKPVKNSLNAIFVVFYDENNSPIAYMKVGSRPQDGNLDCYVAYANDWTKRRTLYNGAKWKDFWGKVSVQRRDNRWRLVVGQYSNRKTNPAPESVFNYGQGMLKDTMDTGWFDLPSESWGKKFARVGVFFSQYHNRPKLGHLSLRRLIVWENLENYRENPIEGTPIMFHEGDTVVIDSNKAQTYLNGELTPALVDPMTDWFPITKGDNYIGVNNFKGKIDIVYNERFK
Physico‐chemical
properties
protein length:1330 AA
molecular weight: 150745,03300 Da
isoelectric point:5,21602
aromaticity:0,12481
hydropathy:-0,49376

Domains

Domains [InterPro]
DC_0142
STR
1–822
DC_0142 IPR006520 G3DSA:2.60.120.860
DC_0077
STR
691–1330
DC_0077
G3DSA:2.40.30.200
ATT
820–940
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
860–938
IPR008841
GENB_a54daa23c8db
1 1330
Architecture
STR
ATT
STR
STR 1-819 | ATT 820-940 | STR 941-1330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_a54daa23c8db
1 1330
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,7901
Central domain 28 232 206 0,3861
C-terminal 233 1330 1097 0,2180
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-232
C-terminal
233-1330

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vb_EcoB_G21-7
[NCBI] 		3230266 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PP848412.1_CDS_[complement(30028..34020)] [NCBI]
Genbank nucleotide accession
PP848412.1 [NCBI]
CDS location
range 30028 -> 34020
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
d7ac5ec66e93863b30ef44f33b2997fb7e25fa905f7198a9862937ca945bf6d4

                    

                    
                      ColabFold
                    
                  

                  

                  

                    

                      Source
                      ColabFold
                    

                    

                      Method
                      ColabFold
                    

                    

                      Resolution
                      0,6939
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
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Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50