Protein

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Genbank accession
YP_009201452.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAELRSTTAIGGNIVWHGGNLRFDPQGETIRYQGHKIYTEHDTPLPGELGNGGTTSAFTKAESDARFAPIAAGGYVKKTGDTMSGKLTNTANEIEINGASPRLLLRDNDNSKNWYIMNSTDSFSIRENDVVTTRFRIDATAADFSVDSIDINMKTALRGFDDWLRINDQNEFASGVYYGSSLLRTDGTLHIGNAGSTMSVNSSAFTYKGNNVFNDAYHPNADKWTSARTLTTTLTGDVSGSASMTIDGSANATVTVTATVANDSHTHDGRYYTEAESDARFANVTGDTFTGNVAISKAGARLSFNETLYATENSGINWITGANQNLELIHEISDVDINTDGGNGQALIIRDNGSTASVAGLEVQGEIFAKVNQRVFHDAYHPNADKLTTARTISLSGDLSGSVSFDGSSNVTLNASIPSIDNYPTFAEVGLRSSDSDFIATGRTVAGVDTSVDWDTLTTPGFYNKLSQGTNRPSGFTGYWYVQNMSYGTTGNTTQVAYSYGLLGNVGTIAMRTRYSGQWEDWVHMYHTDYHPYADKWTTARSLSLGNELSGSVSIDGSSNVTLNASVDHIDNVLNINRVGESNPSIQLNNDTGETRGNIYWNRVDGSLQFRLNGSDGTTAENIMSMYSDRTVFTDAIHTSALLNDANTEQGLLMFSGGTTRLGGSGASAMYFCPLGVNSNASSDFAASLNTSGVMSLNASSSTPLSVHRVEESSVPNVNIRFQGKSIDGNALGEAWYAGSFTNGAGFGIGTNADLSTASNRLFEVGSAGAVVRREGSGATSLTVEGTDPFLVFDQTDIGKYGYIGMDGSGVDSLYVRTPDDSTRRSIYHESNKPTANDVVNNVISLAGLDATKFYPVVFDANNTAGYTCEFTLSVGSGQGSSPYNNNTLTGVARGGGWSDHNAYYDLIMQKYVDSETNIHSIWEGTQGFTGVVIYVRGGQSIDLRSNSRAQVYTSDYSFGGSVFPAGISNPLGAATNATMFAYFSQSGRYTSSSATRYKLNTGEMNLASGSNHGLFKIETDANYDSIIRMSEDNAAHGGFIHYLGATTNEFKIGTRQSDVDTTALTIPRGTSNVFVGGNLYANGGTVQLASKINLTYDSTRVLTVYNGNNSKSAWIGCRNSSYAHMETNATNGFYSYSKFNFASDVDVLLNKNILLGGKRAFRNNEGAWLRLNPYADFSSGIYCGSSLLRTDGQITSGSWSGSNKSARVASNFYDSTWAGNGTAAFSVNNPDTVGAHWAFASFYNGSNIRSGIQILSNSDGRMRFYTNRRANYVEVSSGSLTAQGNVTAYSDARLKENVKVIDNALNKVGELSGYTYDKRKSLDSDEFTRETGVIAQEVQKVLPEAVMESDEDHILSVAYGNMNGLLIEAIKELNEKVDSLQNEVQELKRPWWKKLLRL
Physico‐chemical
properties
protein length:1399 AA
molecular weight: 150719,18420 Da
isoelectric point:5,10655
aromaticity:0,09721
hydropathy:-0,38449

Domains

Domains [InterPro]
DC_0056
ATT
1–356
DC_0056 cd19958 DC_1954
DC_1619
ATT
295–530
DC_1619 IPR030392 Coil
DC_1451
STR
478–975
DC_1451 IPR030392
YP_009201452.1
1 1399
Architecture
ATT
STR
STR
ATT 1-530 | STR 531-975 | STR 1033-1399
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009201452.1
1 1399
Domain Start End Length (AA) Confidence
N-terminal 1 714 714 0,0645
Central domain 715 913 200 0,3018
C-terminal 914 1399 485 0,8618
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-714
Central
715-913
C-terminal
914-1399

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ValKK3
[NCBI] 		1610855 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus valkk3
Host Vibrio alginolyticus NBRC 15630 = ATCC 17749
[NCBI] 		1219076 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009201452.1 [NCBI]
Genbank nucleotide accession
NC_028829 [NCBI]
CDS location
range 218618 -> 222817
strand +
CDS
ATGGCAGAACTAAGATCAACTACCGCAATTGGTGGTAACATAGTTTGGCACGGAGGGAATCTTCGCTTTGACCCGCAAGGCGAGACAATTCGCTACCAAGGCCACAAAATTTATACAGAACATGATACACCACTACCAGGCGAATTAGGTAACGGTGGGACGACTTCTGCATTCACGAAAGCTGAATCTGATGCTCGTTTTGCTCCAATTGCTGCTGGCGGCTACGTGAAGAAAACTGGCGATACAATGTCAGGTAAATTGACGAACACGGCAAACGAAATTGAGATCAACGGAGCGTCGCCACGTCTGTTGTTGCGCGACAACGACAACTCAAAAAACTGGTACATTATGAACTCGACTGATAGTTTCAGTATTCGAGAAAATGATGTAGTCACTACTCGCTTCAGAATTGATGCTACTGCTGCCGACTTTTCTGTTGATAGTATTGATATCAACATGAAAACAGCATTGCGTGGGTTTGATGATTGGTTGAGAATCAATGATCAGAATGAGTTTGCGTCTGGGGTTTATTACGGAAGCTCTCTATTACGTACAGATGGAACGTTGCATATCGGCAATGCTGGTTCTACAATGAGTGTCAACTCTTCTGCATTTACATATAAAGGGAATAATGTATTCAACGATGCTTACCACCCAAATGCAGACAAATGGACATCTGCACGCACTCTTACAACGACTCTAACGGGCGATGTAAGCGGTTCTGCGTCTATGACTATTGATGGGTCGGCTAACGCGACTGTGACTGTTACAGCGACTGTAGCGAACGATTCACACACGCATGACGGTAGATACTACACTGAAGCAGAATCCGATGCACGATTTGCAAATGTTACAGGCGATACATTCACTGGAAACGTTGCGATCAGCAAAGCAGGTGCGCGTTTAAGCTTTAACGAGACTCTATATGCAACCGAAAACTCAGGTATTAACTGGATTACAGGTGCGAATCAGAATCTTGAATTGATTCATGAAATTAGTGACGTTGATATCAATACTGATGGTGGTAACGGTCAAGCGTTGATCATTCGTGATAATGGTTCAACGGCATCGGTGGCGGGTCTTGAAGTACAAGGTGAAATTTTCGCGAAAGTTAATCAGCGTGTGTTTCACGACGCATATCACCCAAATGCAGACAAACTAACAACAGCACGAACAATATCATTGAGTGGTGATTTAAGCGGATCTGTGTCGTTTGACGGTAGCTCAAACGTTACGTTGAACGCATCAATTCCGAGTATCGATAATTACCCTACGTTTGCTGAGGTTGGACTGCGTTCAAGTGACTCGGACTTTATAGCAACGGGTAGAACTGTTGCTGGTGTTGACACATCGGTTGACTGGGATACATTAACTACGCCGGGATTTTACAATAAACTTTCACAAGGTACAAATAGACCAAGCGGGTTTACTGGCTACTGGTATGTTCAGAACATGTCTTACGGTACGACAGGTAATACTACTCAAGTTGCGTATTCGTATGGGTTGTTGGGTAATGTTGGTACTATCGCGATGCGTACTCGATACAGCGGTCAGTGGGAAGACTGGGTTCATATGTATCACACAGATTACCACCCATATGCAGACAAATGGACAACTGCACGTTCATTATCTCTTGGTAATGAATTGAGTGGTTCGGTGTCTATTGATGGTAGTTCGAATGTTACTCTAAACGCATCGGTTGACCATATCGACAACGTATTGAACATCAATCGCGTTGGCGAATCTAACCCGTCTATTCAGTTGAACAATGATACAGGGGAAACTCGTGGTAACATTTACTGGAATCGCGTTGATGGATCGTTACAATTCAGACTAAACGGATCTGATGGAACTACGGCTGAAAACATCATGTCAATGTACTCAGACCGTACAGTGTTTACAGATGCTATTCATACAAGCGCGTTGTTGAATGATGCAAACACTGAACAAGGATTGTTAATGTTCAGTGGCGGTACTACTCGCTTGGGTGGTAGTGGTGCAAGTGCTATGTATTTCTGTCCGCTTGGTGTTAATTCAAACGCGTCGAGTGATTTTGCAGCATCGCTCAACACGTCTGGTGTAATGTCATTGAATGCATCATCATCGACGCCGCTTTCTGTACATCGAGTTGAAGAGTCTTCAGTCCCGAACGTTAATATTCGATTCCAAGGAAAGAGTATTGACGGAAATGCACTAGGTGAAGCGTGGTATGCAGGTTCGTTCACTAACGGAGCAGGGTTTGGTATTGGTACAAATGCAGACTTATCCACAGCATCGAATCGATTGTTCGAAGTTGGTAGCGCGGGAGCAGTTGTTCGCAGAGAAGGTTCTGGTGCAACGAGTCTGACAGTTGAAGGTACTGACCCGTTCTTGGTGTTTGACCAAACAGATATTGGTAAATATGGTTACATTGGGATGGACGGCTCGGGTGTTGATTCACTTTATGTTCGTACCCCGGACGATTCTACAAGACGCAGTATTTACCATGAATCGAATAAACCAACTGCGAATGATGTAGTCAATAACGTAATCAGCCTAGCTGGTTTAGATGCTACTAAGTTCTATCCAGTCGTATTTGATGCAAACAATACTGCTGGTTATACGTGTGAATTCACATTGTCTGTTGGTTCAGGACAAGGCAGCTCACCATATAACAACAACACTTTAACTGGTGTTGCTCGTGGCGGCGGTTGGTCAGACCACAATGCATATTATGACTTGATTATGCAGAAATATGTTGATTCAGAAACAAACATACATTCAATATGGGAAGGTACTCAGGGATTCACGGGTGTTGTTATCTACGTTCGTGGTGGTCAAAGTATAGATCTGCGTAGTAACTCTCGCGCTCAAGTGTATACGTCAGATTACTCTTTCGGTGGTTCGGTTTTCCCTGCGGGGATTTCAAATCCATTGGGTGCTGCAACTAATGCTACTATGTTTGCGTACTTCTCACAGTCTGGTAGATATACATCAAGTTCAGCGACTCGTTACAAGCTGAATACAGGGGAGATGAATTTAGCGTCTGGTTCAAATCACGGTTTGTTTAAAATTGAAACTGATGCGAACTACGATTCTATAATTCGAATGTCAGAAGATAATGCAGCTCATGGTGGGTTTATTCACTATCTAGGGGCTACGACCAATGAATTTAAAATTGGTACACGTCAGAGTGATGTAGATACTACTGCACTGACAATCCCTCGTGGTACTTCTAATGTGTTCGTTGGCGGGAATCTGTATGCTAACGGTGGTACAGTTCAGTTAGCATCGAAAATTAACTTGACTTATGATTCGACTAGAGTGTTAACTGTTTACAACGGTAATAATAGTAAATCTGCATGGATCGGTTGTCGTAATTCGTCATATGCTCACATGGAGACTAATGCAACTAATGGGTTCTATTCATACAGTAAATTCAACTTCGCCTCGGATGTTGATGTATTATTAAACAAAAACATTCTATTGGGTGGGAAGCGAGCTTTCAGAAACAATGAAGGCGCGTGGTTGAGATTGAACCCATATGCTGATTTCAGCTCTGGGATTTATTGTGGTAGTTCATTGCTACGTACAGATGGTCAAATCACTTCAGGTTCGTGGTCTGGCTCGAATAAATCAGCTAGAGTTGCGTCAAACTTTTATGACTCAACGTGGGCGGGTAACGGAACTGCTGCATTTAGTGTAAACAACCCAGATACCGTGGGTGCTCACTGGGCATTTGCTTCTTTCTACAACGGTAGTAACATTCGTTCGGGTATTCAGATTCTATCGAACTCTGATGGTCGTATGCGATTCTATACTAACCGTCGTGCGAATTACGTTGAAGTGAGTAGTGGTAGCTTGACTGCTCAGGGTAACGTTACAGCTTACTCAGATGCACGTTTGAAAGAGAATGTCAAGGTTATTGACAATGCACTCAATAAAGTAGGTGAATTAAGCGGGTATACATATGATAAGCGCAAATCATTAGACTCAGATGAGTTTACTCGTGAAACTGGTGTAATCGCGCAAGAAGTGCAAAAAGTGCTGCCAGAAGCTGTGATGGAAAGTGACGAAGATCATATTCTATCAGTGGCGTATGGTAACATGAACGGTCTTTTGATTGAAGCTATTAAGGAGCTCAATGAGAAAGTCGATTCACTTCAGAACGAAGTACAAGAACTCAAACGCCCATGGTGGAAGAAGTTGCTTCGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c75eb36b1df80233ee2673d4da12e9ea137c061263e85f833da6466db852994e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4753
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50