Protein

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Genbank accession
YP_009844645.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFNLIGSGLINSRKKQQSSTIPDNVLLFLRGTDSVTLDSSNVSKTIAVEQGTPAISSTQFKFSEYGTSLYIPSGAALSVPISELNLTTDFTVWTMEAWIYTVTDSGVSGGLIFGTYNQANNQSSRYLFTTKRYPTDATLATYSMPIGQWNYWKSVRNGNNYKLIVNGSLITERSFTAATSIDKKNWIGRSVGDNNIDSWRLDAYLQDFIITGNVADDSLVIPTSPKYL
Physico‐chemical
properties
protein length:228 AA
molecular weight: 25168,89410 Da
isoelectric point:6,26010
aromaticity:0,11404
hydropathy:-0,18991

Domains

Domains [InterPro]
IPR013320
STR
17–211
IPR013320
DC_2085
STR
20–221
DC_2085
G3DSA:2.60.120.200
STR
27–220
G3DSA:2.60.120.200
PF13385
LEC
81–207
PF13385
YP_009844645.1
1 228
Architecture
STR
STR 17-221 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Nodularia phage vB_NspS-kac65v151
[NCBI] 		2557579 Uroviricota > Caudoviricetes > Ravarandavirus >
Host Nodularia spumigena
[NCBI] 		70799 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009844645.1 [NCBI]
Genbank nucleotide accession
NC_048756.1 [NCBI]
CDS location
range 32492 -> 33178
strand +
CDS
ATGTTTAATCTAATTGGTTCTGGTTTGATTAATAGTAGAAAGAAACAGCAATCTAGCACGATACCAGACAATGTATTACTTTTCTTAAGAGGTACGGACTCTGTAACTCTTGACTCTAGTAATGTAAGTAAAACAATTGCTGTAGAGCAAGGTACACCTGCAATATCAAGCACTCAGTTCAAATTTTCAGAATACGGTACATCCCTATATATTCCATCTGGTGCAGCATTAAGTGTGCCAATATCTGAGCTTAACTTAACAACAGATTTCACTGTATGGACAATGGAAGCATGGATTTACACTGTTACAGATAGTGGGGTGTCAGGAGGATTAATTTTTGGTACTTACAATCAAGCAAATAATCAAAGCAGTAGATACTTATTTACCACAAAAAGATATCCAACTGACGCAACCCTTGCTACCTATTCTATGCCAATAGGGCAGTGGAATTATTGGAAGTCAGTAAGAAATGGAAATAATTATAAATTAATAGTTAATGGTTCTTTAATCACAGAAAGAAGCTTTACAGCCGCAACCAGTATAGATAAAAAAAATTGGATTGGTCGTTCCGTAGGAGATAATAATATAGATTCTTGGAGATTAGACGCTTATCTACAAGATTTTATAATTACGGGAAACGTAGCCGATGACAGCCTAGTAATCCCAACGTCACCTAAGTATTTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a8f89d0a7853eb3d176537bdf50a5871dc7d4a09f652824731edd74daf6f9aa4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity and diversification of Nodularia spumigena cyanophages in the Baltic Sea Sulcius,S., Holmfeldt,K. and Simoliunas,E. — — GenBank