Protein

Genbank accession
AFL46885.1 [GenBank]
Protein name
Ro-like RNA binding protein [Mycobacterium phage Ava3]
RBP type
TF
Evidence RBPdetect2
Probability 1,00
Protein sequence
MSDVLSTFSTRRTPQSQPRIPDQVRNAAGGFAYRTGDELRLHRFLTLGTDGGTYYTNARDLTKDNAEVVLRMVADKGLYTVSQIVEISTAGRAPKNKQALFALALAASHGDDVTRAAALAALPQVARTATHLFEFLNYAQQFRGWGKGLQKAVLRWYADKPVDRAAYQMVKYRQREGWTHADVLRKAHRHIDGVTGEHAALFNWAVGRREGLDIMGNRIEAELPAIVGAFEALQAADSVGAVVRLIEAGHGITWEMVPDQFLNQLLVWEALLSQGVPQTALMRQLPRLTRIGLTTGATGRAIVEQLTDAERLKKARVHPINVLVAQRTYAQGCSERGSSTWTPDRKIADALDAAFYAAFGAVEPANKRTLLALDVSGSMVASVSGLPLSCREASGALAMVIAATEPDTEIVGFTSGGWSSGAFRNRGWRSGGLSKLDLGPRRRLDDNLRAISNLPFGGTDCALPLVWAKETKAEFDTFQIYTDNETWAGDIHVDQALEQYRQSSGIDARVEIVSMTATGTSLCNPDDPGMLDVSGFDSTVPQLLTDHSAGRI
Physico‐chemical
properties
protein length:552 AA
molecular weight: 60050,20830 Da
isoelectric point:6,85037
aromaticity:0,07428
hydropathy:-0,19909

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Ava3
[NCBI] 		1176426 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFL46885.1 [NCBI]
Genbank nucleotide accession
JQ911768.1 [NCBI]
CDS location
range 128625 -> 130283
strand +
CDS
ATGTCGGACGTTCTGAGCACCTTTTCCACACGTCGCACTCCGCAGTCGCAGCCACGCATCCCCGATCAGGTCCGCAACGCTGCCGGAGGCTTCGCCTACCGCACCGGCGATGAGCTGCGCCTGCATCGGTTCCTGACCCTGGGCACCGACGGCGGCACCTACTACACCAACGCTCGGGACCTGACCAAGGACAACGCCGAGGTCGTCCTGCGTATGGTCGCCGACAAGGGGCTGTACACGGTCAGCCAGATCGTCGAGATCTCCACGGCGGGCCGCGCGCCGAAGAACAAGCAGGCGCTGTTCGCGCTGGCCCTGGCCGCATCGCACGGTGACGACGTCACTCGTGCTGCTGCGCTGGCCGCGCTGCCGCAGGTCGCACGCACGGCGACGCACCTGTTCGAGTTCCTCAACTACGCCCAGCAGTTCCGTGGCTGGGGCAAGGGTCTGCAGAAGGCCGTGCTCCGGTGGTACGCGGACAAGCCGGTCGACCGTGCTGCTTACCAGATGGTCAAGTACCGCCAGCGTGAGGGCTGGACGCACGCCGACGTGCTGCGCAAGGCGCACCGTCACATCGACGGGGTGACTGGCGAGCATGCCGCGCTGTTCAACTGGGCGGTGGGCCGTCGCGAAGGCCTGGACATCATGGGCAACCGGATCGAGGCCGAGCTGCCCGCAATCGTCGGCGCCTTTGAGGCGCTGCAGGCAGCCGACTCGGTGGGCGCCGTCGTGCGCCTCATCGAGGCCGGGCACGGCATCACCTGGGAGATGGTCCCGGACCAGTTCCTCAACCAGCTTCTGGTCTGGGAGGCCCTGCTCTCTCAGGGGGTGCCGCAGACGGCGCTCATGCGCCAGCTGCCGCGTCTGACCCGGATCGGGCTGACGACCGGTGCCACCGGGCGTGCCATCGTCGAGCAGCTGACGGACGCCGAGCGGCTCAAGAAGGCCCGCGTGCACCCGATCAACGTGCTGGTGGCCCAGCGGACCTACGCGCAGGGCTGCTCGGAGCGGGGGTCGAGCACCTGGACGCCGGATCGCAAGATCGCCGACGCACTCGACGCTGCGTTCTACGCTGCGTTCGGCGCGGTCGAGCCTGCCAACAAGCGCACGCTGCTGGCCCTGGACGTCTCGGGCTCGATGGTCGCGTCGGTCTCCGGCCTGCCGCTCTCGTGTCGCGAAGCCTCGGGCGCGCTGGCCATGGTCATCGCGGCCACCGAGCCGGACACCGAGATCGTCGGATTCACCTCGGGCGGGTGGTCCTCGGGCGCGTTCCGCAACCGAGGATGGCGTTCGGGCGGGTTGAGCAAGTTGGACCTCGGCCCTCGGCGCCGTCTGGACGACAACCTGCGGGCGATCAGTAACCTGCCGTTCGGCGGGACCGACTGCGCGTTGCCGTTGGTCTGGGCCAAGGAGACCAAGGCCGAGTTCGACACCTTCCAGATCTACACCGACAACGAGACCTGGGCGGGCGACATCCACGTCGACCAGGCGCTGGAGCAGTACCGTCAGTCCTCGGGTATCGATGCTCGGGTCGAGATCGTGTCCATGACGGCCACCGGCACCAGTCTGTGCAACCCGGACGACCCGGGCATGCTGGACGTGTCGGGCTTCGACTCGACGGTGCCGCAGCTTCTCACCGATCACTCGGCGGGTCGCATCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.