Protein

View in Explore
Genbank accession
AUR95877.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPEVQPTNSPVPSDNPADARDNFKRLDEVLNLQSPRTSPTRTGRILNTIYGLEEAYVQTPINGGVWGAGVEFTAYNQFMIFGGVAYKPKTTTPLPYISTSSPDLDFVVPFSEISGSNIGNYTDIVFNSIADMQAGIPGFQPSVGNNLKVQGENDLFTNYKVVSDESDVSLGGGLWAKRLDVDSSSLVAATQKNTEQDERIASAESDISALQSGQGSGVVGYATQSELFSDLNHEENTVGYVTNDSTTGNNGTYRKTGASGSGSWVQSNQDLTSIAFQNSLLNEERIERISTINSGVMFPELNDYVKGSQGGATPGLTWINIDSESSIPGYDGEDGFISSVNVNVTAAGNIWFKLYQFDGGQNWTFLRQAGPFSVDTSTLSVQIPGGMQINRGDCIGYYLSNGAVEVPTTPASGGLYNFSGNNTTGGQSSNAQVPTSTLMLNPVVEVIAPKLEPRVESLEDASVIRTRIAGEDDPEVVAGASSNNNFIRQNPVVGASTITNFTVATTTATVISLRAYSLISANNFRIENTQDFTCSIGVNEFEGLSFEIEQGQYLGTLGSGIALKAQGTDDSGDDYQTVRQGVGGVNVGDVITAPILNAGPFAFQYQIESNESVPDVVSRNSLNISSNTTRIDRLEGSMATSVGIITPDEAAGQDVLISRVGVNYGLRPLISQTTTFALGDSTVAFWSPGIEALIDLIGTVRIKESLAVGGDTIAGQKAKWIAENVTPEEVGYVVIQIGLNDIDPDVSTTPARIAEIQDLVDTVRGDVGNTKPIFISKMSPARQRFVDLWGETRGEQGYQRWLSMNEAIAGLGSSPITNVDGRILSHEPLLNDGSGNLRPEFGVGDNIHTNAAGRRINADAWIETVRSVSGYVM
Physico‐chemical
properties
protein length:873 AA
molecular weight: 93101,69370 Da
isoelectric point:4,35326
aromaticity:0,07560
hydropathy:-0,22302

Domains

Domains [InterPro]
DC_2149
ATT
37–270
DC_2149 IPR036514
SSF52266
STR
675–867
SSF52266
IPR036514
STR
675–867
IPR036514
cd00229
ENZ
677–863
cd00229
AUR95877.1
1 873
Architecture
ATT
STR
ATT 37-270 | STR 669-867 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.214.O._10N.222.54.F11
[NCBI] 		1881264 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR95877.1 [NCBI]
Genbank nucleotide accession
MG592584.1 [NCBI]
CDS location
range 22838 -> 25459
strand +
CDS
ATGCCAGAAGTACAACCAACAAACAGCCCAGTGCCAAGCGATAACCCTGCAGATGCTCGCGATAACTTTAAGCGACTGGATGAGGTGTTAAACCTTCAATCTCCTCGAACAAGCCCGACAAGGACAGGAAGAATATTAAACACCATTTACGGACTGGAAGAGGCCTACGTTCAAACTCCGATAAATGGCGGGGTGTGGGGTGCTGGCGTTGAGTTCACGGCTTACAATCAATTTATGATTTTTGGTGGTGTGGCGTACAAGCCAAAAACAACCACGCCTCTACCTTACATCTCGACATCATCTCCAGACCTTGATTTTGTAGTGCCATTTAGTGAGATATCCGGCTCGAACATTGGAAACTACACAGATATCGTATTTAATTCAATCGCAGACATGCAGGCGGGAATCCCCGGCTTTCAGCCTTCTGTTGGTAATAACTTAAAGGTTCAAGGTGAGAATGATTTATTCACCAACTACAAAGTTGTTAGCGATGAGTCAGATGTTAGCTTGGGCGGTGGGTTGTGGGCTAAGAGGCTGGATGTTGATAGCTCCAGCCTAGTTGCTGCGACTCAAAAAAACACAGAACAAGATGAAAGGATCGCAAGTGCAGAAAGCGACATATCAGCCCTTCAATCTGGCCAGGGCTCTGGTGTTGTTGGTTACGCCACGCAATCTGAACTTTTTTCAGATCTAAACCATGAAGAAAATACTGTCGGGTATGTCACGAATGACAGCACGACGGGGAATAATGGCACATACAGAAAGACTGGCGCGTCCGGCTCTGGGTCTTGGGTGCAATCAAACCAAGACCTAACAAGTATTGCTTTTCAAAACTCACTACTTAACGAAGAGAGGATTGAAAGAATATCAACAATTAATAGCGGCGTTATGTTTCCTGAACTTAATGACTACGTGAAAGGCTCTCAAGGTGGAGCGACCCCGGGCCTTACATGGATAAATATAGACAGTGAAAGTTCAATCCCTGGCTATGATGGTGAAGACGGCTTTATATCGTCCGTTAATGTAAACGTAACGGCTGCGGGTAATATTTGGTTCAAACTCTACCAGTTCGACGGTGGACAAAACTGGACATTTTTAAGGCAGGCCGGGCCTTTTTCAGTTGATACATCAACACTAAGCGTTCAGATTCCTGGGGGAATGCAAATAAACCGAGGTGACTGTATAGGGTATTACTTATCAAATGGAGCTGTTGAGGTTCCGACAACTCCGGCGTCTGGCGGGCTTTATAACTTTAGCGGGAATAACACCACAGGAGGGCAGTCTAGCAATGCTCAAGTCCCAACTAGCACGTTAATGCTAAATCCTGTCGTTGAGGTTATAGCGCCAAAACTAGAGCCTAGGGTTGAGTCTCTAGAGGATGCCTCAGTCATAAGAACTAGAATTGCAGGTGAAGACGACCCGGAAGTTGTTGCGGGGGCGTCTAGCAATAATAACTTTATAAGACAAAACCCCGTCGTAGGCGCTTCAACGATAACAAACTTTACTGTAGCTACAACCACAGCAACAGTAATTAGCTTAAGGGCTTATTCTCTTATTTCAGCTAACAATTTCAGGATTGAAAATACTCAAGATTTTACTTGTTCTATTGGCGTTAATGAATTTGAAGGTCTTTCTTTCGAGATAGAGCAGGGGCAGTACCTTGGTACGCTAGGGAGCGGGATCGCACTAAAAGCACAAGGTACCGATGATTCAGGAGACGATTACCAAACAGTTAGGCAAGGGGTTGGAGGGGTTAACGTTGGCGATGTAATTACAGCTCCGATACTAAATGCAGGGCCTTTTGCATTTCAATACCAAATTGAGTCTAACGAATCAGTGCCTGATGTGGTTTCTAGAAATTCTTTAAACATATCAAGCAATACAACAAGAATCGATAGACTTGAAGGCTCCATGGCTACCTCTGTAGGAATTATAACTCCAGACGAAGCGGCCGGCCAGGATGTGCTAATCTCAAGAGTTGGCGTAAACTACGGGTTGAGGCCTTTAATTAGTCAGACAACTACTTTTGCCCTTGGAGATAGCACTGTAGCCTTTTGGAGTCCAGGTATTGAAGCTCTTATTGATCTTATAGGGACGGTTAGAATTAAAGAGTCGTTAGCGGTTGGTGGCGATACTATCGCTGGACAGAAGGCTAAGTGGATTGCTGAAAATGTAACACCTGAAGAGGTTGGCTATGTTGTGATACAAATCGGACTAAACGACATAGACCCAGACGTCTCTACAACCCCAGCAAGAATTGCAGAAATACAAGATCTTGTTGATACAGTGAGGGGGGATGTTGGCAACACGAAACCAATATTTATTTCGAAAATGTCACCCGCAAGACAAAGATTTGTGGATTTATGGGGAGAAACTAGGGGTGAGCAGGGGTATCAAAGATGGTTGTCAATGAATGAGGCTATTGCTGGTCTAGGTTCTTCACCTATAACTAATGTTGATGGTAGAATTTTAAGTCACGAACCATTATTAAATGACGGAAGCGGCAATCTAAGACCTGAGTTTGGGGTTGGAGATAACATTCACACAAACGCAGCGGGAAGACGTATAAATGCTGACGCTTGGATTGAAACGGTAAGAAGCGTTTCTGGTTATGTAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce15fd8512488a4980e65343ffeb8b5c3e73800b52e90adbd195f44a0b913d09
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7271
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank