Protein

Genbank accession
XIJ71407.1 [GenBank]
Protein name
holin
RBP type
TSP

evidence: RBPdetect2

probability: 0,6723

Protein sequence
MPVVWHCGFNGFINNTMSQGQAGLVITTNNTQAASTAMDSNNMINNVFGRGGNGDQNGGALPLIRYYGRKYTPGGSYVASYVFGRVKPSFFDNSVPCLSNELYQPSTLSDWFAGWEFRIDTLFPNDYATASWRIGFRIGRATHPTYQIGYNVKICPAGINAAETVTLFTVPIAAGQPEKYVEIEWISDTKTLNIYQDDELVSTRPNFTASSMAYGFIMMCELYVGNSFSTTPFFGFEVRDMYIQRILSDADQRLGSSTRVYTFNPVTDDVVQFARPEGFDSNASVVLTPIGSVGTTPAPSVSTAVLSGDVVGQQDLYNVDISKVSTRLASVEAVNIRTMARNPLLGNRQSAAIAKSGATQTQSDKTSKLEQGGLWRFNTLQMVSDPADGSRWTLAKLAGLKVGTKFVA
Physico‐chemical
properties
protein length:408 AA
molecular weight: 44474,50390 Da
isoelectric point:6,18365
aromaticity:0,11029
hydropathy:-0,14853

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage HMD-P1
[NCBI] 		3374761 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XIJ71407.1 [NCBI]
Genbank nucleotide accession
PQ471667.1 [NCBI]
CDS location
range 21204 -> 22430
strand -
CDS
ATGCCTGTAGTATGGCACTGCGGTTTTAATGGTTTTATTAACAATACAATGAGTCAGGGGCAAGCGGGACTGGTTATCACCACTAACAATACCCAAGCGGCGTCCACCGCTATGGACTCTAATAACATGATTAACAACGTCTTCGGGCGCGGAGGAAATGGCGACCAAAATGGCGGGGCGTTGCCCTTAATTCGGTATTACGGGAGGAAATATACACCGGGGGGTAGTTATGTTGCTTCTTACGTTTTTGGCAGGGTGAAGCCCTCTTTCTTTGATAATTCCGTGCCGTGCCTTAGCAACGAATTGTACCAACCATCTACGCTTTCAGACTGGTTCGCAGGGTGGGAATTTCGTATCGATACGTTATTTCCTAATGACTACGCGACCGCAAGCTGGCGTATTGGATTCAGAATTGGCCGTGCGACACACCCTACCTATCAAATCGGGTATAACGTTAAGATCTGCCCGGCAGGCATCAACGCGGCTGAAACTGTTACTCTTTTCACGGTTCCAATCGCGGCGGGACAGCCTGAAAAATACGTGGAAATTGAATGGATCTCAGATACCAAAACTTTGAATATCTATCAGGATGATGAACTGGTTTCCACTCGCCCAAACTTCACGGCGTCCTCAATGGCATACGGTTTTATCATGATGTGTGAACTGTACGTCGGTAACTCGTTTAGCACGACTCCGTTTTTTGGATTTGAAGTACGCGATATGTACATCCAACGTATTCTTTCTGACGCAGACCAACGATTAGGGTCATCCACGCGAGTATATACGTTCAACCCTGTGACGGATGATGTTGTGCAGTTCGCCCGGCCCGAAGGTTTTGATTCTAACGCCTCGGTCGTCCTGACGCCGATTGGGTCGGTCGGCACAACTCCTGCACCGTCTGTTAGTACTGCGGTTTTAAGCGGGGACGTTGTTGGACAGCAAGACCTGTATAACGTAGATATTTCAAAAGTTAGCACTCGTCTGGCATCGGTAGAAGCGGTTAACATCCGAACGATGGCCCGAAACCCGTTGCTAGGGAACCGCCAGTCAGCCGCGATCGCTAAATCCGGGGCGACACAAACCCAAAGCGATAAAACTTCGAAACTCGAACAGGGCGGTTTATGGCGGTTTAATACGCTGCAAATGGTGTCAGACCCTGCCGACGGATCACGCTGGACGCTTGCTAAATTGGCCGGGCTTAAAGTCGGTACCAAATTCGTCGCGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID: 236628

Method: ESMFold

Resolution: 0,5877

Evidence: 0,5512

Literature

No literature entries available.