Protein

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Genbank accession
YP_009904657.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MSLKYMQGFETTRDDSDLRLQNWSVSPQAPTTKKVTFAPSVTNVPGTSLRPVGAFQSSAASSALWGAAADQTWGYYNTGYTVQQAWNAGGITLGFGAKLNSNAGYYVSAALGQGCGFDGTRYWGFRRATGTNISTSPDLINWTDTPAQISGALAMTYSQTSSVPLVVSNTSTNTTAINYSTNNGSSWTNVALPVTPSASVSSPMCPVDTGNSAFPHVVPVISNTSSGFQGIMYAMVGDAKKGAGNFTLASSGGGATQAINAVSTVSRLLGGSSGVVALFYSGYGLMAVAANSALNTSGAWTSFTVTATGWTAPGPSGNYITDMAFLPAANRYVFATNMGLMYATNPGGTPGTPSPLSGTVTMTLGLSLPVLPTQLILVGSTLYAVTNGGSVYSTLDGVTWTLVGTPLTNVATGGYTNYLYDGSKYVLFSSSVTGIIATTPDMVTNWQALNVYEALDATATGLTGGVGSGLVVSASGAPAANGQFTVFNTYGGFLHLFVAGASGGNRQWGILDSVGNSTTYLTGSLSATSNLYHYFEMRYVKNSASVNQFDVYMYIDGVQIGSKFTYQFTRNIDTTGLFLIGFQRSGCFTAIDDIYVTLEDGTGLSGNLGQINIAVQRPDADVQAQWVPTGGSGTNASAVNQAALSSLSSKNVASSNSGDVDVYSSADTIPAGYTARAQLVETYFTKTSTTAPVVSVGLRSSGAETDSSQVTVSGTTPAYVSVLSDIDPNGNKAWTTNSIKASQFALNHIT
Physico‐chemical
properties
protein length:750 AA
molecular weight: 77554,12810 Da
isoelectric point:5,10229
aromaticity:0,10133
hydropathy:0,04960

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009904657.1
1 750
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,9431
Central domain 26 246 222 0,9183
C-terminal 247 750 503 0,4511
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-246
C-terminal
247-750

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BcepSauron
[NCBI] 		2530033 Uroviricota > Caudoviricetes > Sarumanvirus >
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009904657.1 [NCBI]
Genbank nucleotide accession
NC_049851 [NCBI]
CDS location
range 176356 -> 178608
strand -
CDS
ATGAGTCTCAAATACATGCAGGGTTTTGAAACGACCCGCGACGACAGCGACCTGCGGCTGCAAAACTGGAGCGTTTCCCCACAGGCTCCCACAACCAAGAAGGTGACGTTTGCGCCTAGCGTTACTAACGTCCCGGGAACGTCACTGCGTCCCGTGGGTGCGTTTCAGTCGTCTGCGGCATCGTCGGCTCTGTGGGGCGCTGCTGCTGACCAGACGTGGGGATACTACAATACGGGCTACACAGTTCAACAGGCTTGGAACGCGGGCGGTATCACACTCGGTTTTGGTGCCAAACTCAACAGCAACGCTGGGTATTACGTTAGCGCAGCACTGGGCCAAGGGTGCGGTTTTGACGGAACCCGTTACTGGGGGTTCCGTCGGGCAACAGGCACGAACATCAGCACGTCGCCAGACCTGATCAACTGGACGGACACGCCAGCACAGATATCGGGTGCCCTAGCTATGACGTACTCCCAAACGTCTAGCGTGCCGCTGGTTGTCTCCAACACAAGCACTAATACGACGGCTATAAACTACTCAACGAATAACGGTTCGTCTTGGACTAACGTAGCACTACCAGTCACTCCGAGTGCGTCGGTTTCCAGCCCAATGTGTCCAGTGGACACCGGCAACTCGGCGTTTCCTCATGTTGTTCCAGTGATATCCAATACCAGTTCAGGATTTCAGGGCATCATGTATGCAATGGTGGGGGACGCCAAGAAGGGCGCTGGCAACTTTACCCTAGCGTCGAGCGGGGGCGGTGCAACTCAAGCCATTAACGCGGTTTCTACCGTAAGTCGTTTGTTGGGCGGTAGCAGTGGTGTTGTTGCTCTTTTCTACTCCGGTTACGGGCTGATGGCAGTTGCCGCAAACTCAGCGCTGAACACATCGGGCGCGTGGACCAGCTTCACGGTGACCGCCACGGGTTGGACGGCACCGGGTCCAAGTGGTAACTACATTACGGATATGGCGTTCTTGCCCGCTGCGAATCGCTATGTGTTTGCCACGAACATGGGCCTTATGTACGCGACCAATCCGGGCGGCACTCCCGGAACGCCTAGTCCGCTGTCCGGAACAGTGACGATGACGCTGGGTCTGAGTTTGCCAGTACTGCCGACCCAGCTTATACTGGTCGGCAGCACGCTCTATGCGGTGACAAACGGTGGGTCGGTATACAGCACACTAGATGGTGTTACATGGACTCTGGTGGGCACTCCACTCACGAACGTCGCGACCGGCGGCTATACAAATTATCTGTATGACGGTAGCAAATACGTACTGTTCTCAAGCTCCGTTACCGGTATTATCGCCACCACCCCAGACATGGTGACCAATTGGCAGGCGCTGAACGTATACGAGGCGCTCGACGCCACAGCAACTGGATTGACAGGTGGTGTTGGCAGCGGTCTGGTGGTATCTGCATCCGGAGCGCCCGCCGCGAACGGCCAGTTTACGGTCTTCAACACGTACGGTGGATTCTTGCACCTATTCGTGGCGGGGGCCTCTGGTGGCAATCGTCAGTGGGGTATTCTGGATTCGGTAGGAAACAGCACAACGTATCTGACAGGATCGCTGTCTGCAACGTCGAACCTGTATCACTACTTCGAAATGCGGTATGTCAAGAACAGCGCGTCAGTCAACCAGTTCGATGTGTACATGTACATTGACGGTGTGCAGATCGGCTCGAAGTTCACCTATCAGTTCACACGCAACATCGACACGACGGGCCTGTTCCTGATCGGCTTCCAACGTTCGGGGTGCTTTACCGCAATCGACGATATCTACGTGACGCTCGAAGACGGCACCGGCCTTAGCGGTAACCTCGGTCAAATCAACATCGCGGTTCAGCGTCCCGATGCCGATGTTCAGGCCCAATGGGTCCCGACCGGTGGCTCGGGCACTAACGCCAGCGCAGTGAATCAGGCTGCACTATCGAGCCTGAGTTCGAAGAACGTAGCGTCCTCGAACTCCGGAGACGTTGACGTGTACTCTTCGGCAGACACGATTCCGGCAGGCTATACGGCTCGGGCACAGTTGGTGGAGACGTATTTCACCAAAACCTCGACCACGGCCCCGGTTGTTAGCGTCGGGTTGCGGAGTAGCGGTGCTGAAACGGACAGTTCGCAAGTCACGGTGTCAGGTACGACTCCTGCATACGTGTCGGTTCTGTCTGATATCGATCCGAACGGCAACAAGGCGTGGACCACCAACTCGATCAAAGCCTCGCAGTTTGCTTTGAACCACATAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f83b581238ea901cbe5f29537c066fd1b2a86b4d59c6c5a3dad86f9cb6c6a9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6112
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Burkholderia cenocepacia phage BcepSauron Park,K., Gonzalez,C., Liu,M. and Gill,J. 2019-03-28 — GenBank