Protein

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Genbank accession
UTC25201.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MGMMRGITGEQNGVYFGYALYDLVNEKLIPFDQIGEGGSSVPGPQGPQGEKGDKGDPGPQGPQGVQGAPGNPGEKGPQGGQGPQGEVGETGPQGPQGPVGPTGPQGEKGERGEPGPQGPEGPAGPQGEQGPAGATGPVGPSGATGLVWRGNYDDSISYDVNDAVGYQGATYFSTQPSTGIPPEATGTRVNDHWALMASEGAPGPVGPAGPTGPQGLQGPVGPAGPSGATGPAGPAGPQGEQGPQGLQGPQGQRGIQGVQGEKGEKGDQGPVGPAGPAGPQGEQGPPGETGPKGDKGDNALPTISGIYASPINKTNSWIQLPGNNLGNVRLILSANNKVSQTRVGFSAGTSSVAKRIGFSYALTTTYTDVNRIKSGRTGPTSVSNTVVYPSDSTINVGFGDKAVFVVFCHDTLEAWEVTVAGVAAKTAVGDTSGRLAVHAVQISGDSELLTGNVYNP
Physico‐chemical
properties
protein length:456 AA
molecular weight: 45329,99550 Da
isoelectric point:4,70669
aromaticity:0,05263
hydropathy:-0,57215

Domains

Domains [InterPro]
DC_1939
ATT
2–45
DC_1939 DC_0876 IPR008160 DC_1012
IPR050149
Unmapped
37–298
IPR050149
IPR008160
STR
88–145
IPR008160 DC_2298
G3DSA:1.20.5.320
STR
269–321
G3DSA:1.20.5.320
UTC25201.1
1 456
Architecture
ATT
STR
RBD
ATT 2-45 | STR 70-330 | RBD 331-454 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PcaM_P7_Pc
[NCBI] 		2961681 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum
[NCBI] 		554 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UTC25201.1 [NCBI]
Genbank nucleotide accession
ON712643.1 [NCBI]
CDS location
range 11176 -> 12546
strand +
CDS
ATGGGAATGATGAGAGGTATCACCGGGGAGCAGAACGGTGTATACTTTGGGTATGCACTTTACGATCTCGTTAACGAAAAACTTATCCCCTTTGACCAAATTGGCGAGGGAGGGTCTTCTGTACCTGGTCCACAGGGTCCTCAAGGGGAGAAGGGGGATAAGGGAGACCCCGGTCCTCAAGGACCTCAAGGTGTCCAAGGAGCGCCGGGCAATCCTGGTGAAAAGGGTCCTCAAGGGGGCCAAGGCCCTCAGGGCGAGGTAGGGGAAACTGGTCCTCAAGGACCTCAGGGGCCAGTAGGACCAACAGGCCCTCAGGGCGAGAAAGGGGAGAGGGGTGAACCAGGACCTCAAGGTCCTGAAGGCCCTGCTGGCCCGCAAGGGGAACAGGGACCCGCCGGGGCAACAGGCCCCGTTGGACCTTCCGGTGCGACAGGTCTTGTATGGAGAGGAAATTATGATGATTCAATCTCCTACGACGTTAACGATGCAGTTGGGTATCAGGGTGCCACATATTTCTCTACTCAGCCATCCACAGGTATCCCACCGGAAGCTACTGGTACAAGGGTTAACGACCACTGGGCACTGATGGCCTCAGAAGGTGCGCCGGGACCAGTAGGTCCAGCAGGACCAACAGGTCCGCAGGGTTTGCAAGGGCCAGTAGGACCCGCAGGGCCTTCCGGTGCTACAGGTCCTGCCGGACCCGCCGGACCACAAGGAGAGCAAGGCCCTCAAGGGCTACAAGGACCACAAGGTCAGCGAGGTATTCAAGGTGTTCAGGGTGAAAAAGGGGAAAAGGGGGATCAAGGACCAGTAGGTCCGGCAGGCCCTGCTGGCCCGCAAGGGGAACAGGGACCTCCGGGGGAGACTGGCCCTAAGGGAGATAAGGGTGACAATGCCCTCCCGACCATTTCTGGGATTTATGCCTCCCCGATCAACAAAACGAACTCTTGGATTCAACTCCCCGGTAACAACCTGGGGAATGTTCGTCTTATTCTCTCTGCAAACAACAAAGTCTCTCAGACCCGAGTTGGTTTCTCCGCAGGAACTTCGTCAGTGGCGAAGAGGATCGGATTCTCTTATGCACTAACAACAACCTACACGGACGTAAATCGTATTAAGTCCGGGAGAACCGGCCCCACCTCGGTATCAAATACAGTAGTTTATCCGTCGGACTCTACTATCAACGTGGGGTTCGGCGACAAGGCAGTCTTTGTTGTTTTTTGCCACGACACCCTTGAAGCATGGGAAGTGACAGTGGCAGGGGTTGCTGCAAAAACTGCTGTGGGTGATACAAGCGGGCGTTTGGCTGTACATGCAGTACAGATCTCCGGGGACAGTGAGTTACTCACAGGTAATGTCTACAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
be1e7cb534c33d0b764f3a591d0f66b11859186215c39c6596da9c07d3986aa6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pectobacterium carotovorum phage vB_PcaM_P7_Pc is a new member of the genus Certrevirus Naligama,K.N. and Halmillawewa,A.P. — — GenBank