Protein

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Genbank accession
QAX96567.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MSDTIVLGLQADVDALKTTVGNNSSGLVQAVNQLESEGGSEITDRTGEVVNLNNELNPQVAWLSEVTNLPSDAPTTGALYLLTIEGVRDQAEQTVKQTVSLFMPGNDFPEGQWSRHVYFSGNAVSGRSDWRTDLFTGPQLDRFSIYHEEIARYSGRLVAAGTSSENFNSQFMVPDTKIGNDSSEFNIRIDSFLSGTTPGIRISADSANTCNYFMGYMLSNDYGANDTVEEQASEHYGSMTRSRDTREYKLGPHASRRSVYFRIVIGRGGGNNKENMVVEGNVTRGETDNEVVWACRVVSNSKNNEVVDV
Physico‐chemical
properties
protein length:309 AA
molecular weight: 33913,80130 Da
isoelectric point:4,66105
aromaticity:0,08091
hydropathy:-0,48576

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAX96567.1
1 309
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,8429
Central domain 131 298 169 0,0545
C-terminal 299 309 10 0,7418
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-298
C-terminal
299-309

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VmeM-Yong XC32
[NCBI] 		2500767 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio mediterranei
[NCBI] 		689 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX96567.1 [NCBI]
Genbank nucleotide accession
MK308675 [NCBI]
CDS location
range 244501 -> 245430
strand +
CDS
ATGAGTGATACAATCGTCCTAGGACTACAGGCTGACGTAGATGCCCTTAAAACTACCGTAGGTAACAATAGTTCAGGCTTAGTGCAAGCCGTCAACCAGTTAGAGTCCGAAGGCGGAAGCGAAATTACAGACCGCACTGGCGAAGTAGTAAACTTGAATAACGAGTTAAATCCTCAAGTGGCTTGGTTGTCTGAGGTTACTAATCTCCCATCGGATGCCCCTACTACGGGAGCGCTCTATCTCTTGACAATAGAGGGCGTTCGAGACCAAGCCGAACAAACCGTGAAACAAACGGTTTCGCTCTTCATGCCAGGCAATGATTTCCCAGAAGGTCAATGGTCACGTCATGTCTACTTTAGTGGAAATGCCGTGAGTGGACGTTCTGATTGGCGAACGGACCTTTTCACTGGCCCTCAATTGGACCGGTTCAGTATTTACCATGAAGAGATAGCACGATATTCCGGTAGACTTGTTGCAGCCGGTACTTCATCTGAAAACTTTAATTCTCAGTTTATGGTTCCAGATACTAAAATTGGAAATGACAGTTCGGAGTTTAACATTCGTATTGACTCTTTCCTTTCAGGAACAACTCCCGGTATTCGTATCTCGGCCGATAGTGCTAATACATGCAACTATTTCATGGGCTATATGCTGTCTAACGACTACGGTGCTAATGACACAGTAGAAGAGCAAGCCTCTGAACATTACGGTTCCATGACGCGAAGTCGCGATACGCGAGAATATAAACTAGGCCCACACGCCTCACGTCGTAGCGTTTACTTTAGAATCGTAATAGGTCGCGGTGGCGGTAACAATAAAGAAAACATGGTTGTCGAAGGCAACGTTACAAGAGGCGAAACAGACAACGAAGTTGTCTGGGCTTGTCGTGTGGTTTCCAATAGCAAAAATAACGAGGTAGTCGATGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6dce5430c792d5f5390e55150343eb4740fdb65de7ad01bbf94c57b7666a4543
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4936
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50