Protein

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Genbank accession
UJP30352.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TSP
Evidence DepoScope
Probability 0,85
Protein sequence
MKQNLIVGQSVDDGSGDYLRKGGLKINNNFDDLYSELGDGSVPFAAGAWKTFKASPTGTTLNAKFGQAFAINTQAARVNVQLPKGTANDYNKVIKLRDVWSTWRLSPITVIPAQGDTLKGSASPKIFNTNFQDLELVYCAPGRWEYIENKTVDKLTNGNLSTVAKKSIIATAGQTDFLNIFDGVDYNEDSLNVYRRGNILYYGETSVMDKANADYGSPGAVEGQLVELNGKDIRLKVPCVEGEVITFETFLDGIGVYRSSYNKLAIQIRDSAQTTSQTIPGSIIVDNLATLRRITLDDMGVLPGVGVNPNSLEISLNGKELLEAGTAGLPLFYCEGAEGGYAEDCINNGGQWVNSNQDYRLEFDSTGINVEAIIFGEAFEDKDLLTVRWFNNNIGTTMDINDIMAETDHVYMNAEQLVTLKNRIEYTNYDEPNQKNMRPVADDVMIKVNNIAAFFDVIYPIGTIYENAHNHANPADYMGFGVWKLYSQGRVTAGWNNDSSDPYFARNNNNLNENGQPSLTAGGTVGDLTFTLGKEHIPELMSRDKVLISDPEHGSVVIGGCQLDPDAQGPGYSKYREDTVAVNNGVVPNDITKIQPTITVYRWIRVG
Physico‐chemical
properties
protein length:607 AA
molecular weight: 66642,64540 Da
isoelectric point:4,67577
aromaticity:0,09226
hydropathy:-0,33871

Domains

Domains [InterPro]
IPR036240
STR
1–236
IPR036240 IPR054430 IPR053827
IPR034695
Unmapped
1–607
IPR034695
DC_2238
STR
1–590
DC_2238
IPR008987
ATT
2–146
IPR008987 IPR056391
G3DSA:1.20.5.960
Unmapped
13–41
G3DSA:1.20.5.960
UJP30352.1
1 607
Architecture
ATT
STR
ATT
STR
ATT
ATT 1-146 | STR 147-160 | ATT 161-267 | STR 268-453 | ATT 454-606 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJP30352.1
1 607
Domain Start End Length (AA) Confidence
N-terminal 1 319 319 0,9392
Central domain 320 518 200 0,1239
C-terminal 519 607 88 0,9692
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-319
Central
320-518
C-terminal
519-607

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Kpn6N
[NCBI] 		2894286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJP30352.1 [NCBI]
Genbank nucleotide accession
OK631811 [NCBI]
CDS location
range 155661 -> 157484
strand +
CDS
ATGAAACAAAATTTGATAGTAGGCCAATCAGTCGATGACGGGTCTGGTGATTACCTCCGTAAAGGTGGTCTTAAAATTAATAACAACTTTGATGATTTATATTCAGAGTTAGGGGATGGATCAGTTCCATTTGCTGCAGGAGCATGGAAAACTTTTAAAGCTAGCCCTACTGGAACTACTTTAAATGCTAAGTTTGGTCAGGCTTTTGCTATTAATACCCAGGCAGCAAGAGTTAACGTTCAGCTTCCAAAGGGAACAGCTAATGACTATAACAAAGTTATTAAACTTCGTGATGTTTGGTCAACCTGGCGATTAAGCCCAATCACAGTTATTCCTGCTCAAGGCGATACATTAAAAGGTTCAGCTTCTCCTAAAATTTTCAATACTAACTTCCAAGATTTGGAATTGGTTTATTGCGCCCCTGGTCGCTGGGAATATATTGAAAATAAAACAGTAGATAAGCTAACTAATGGCAACTTAAGTACTGTAGCGAAAAAATCAATTATTGCTACCGCCGGACAGACTGACTTTCTTAACATTTTTGATGGCGTAGATTATAACGAAGACTCACTTAACGTATATCGTCGTGGTAATATTTTATACTACGGTGAAACCAGCGTTATGGATAAAGCTAATGCTGACTACGGTTCTCCTGGAGCAGTAGAAGGTCAATTGGTAGAATTAAACGGTAAAGACATTCGTTTAAAAGTTCCGTGTGTTGAAGGGGAAGTAATAACATTTGAAACCTTCTTAGATGGAATTGGTGTATATCGGTCTTCATACAACAAATTAGCTATCCAGATACGAGATTCAGCCCAGACTACATCCCAGACGATTCCTGGGTCAATTATAGTAGATAACCTTGCTACTCTCCGCAGAATCACTCTGGATGACATGGGTGTACTTCCAGGCGTAGGGGTAAATCCTAACTCGCTTGAAATTTCATTGAACGGAAAGGAATTACTCGAAGCTGGAACTGCAGGTCTTCCTTTATTTTATTGTGAAGGCGCGGAAGGCGGATATGCAGAAGACTGTATAAACAACGGTGGTCAATGGGTAAATTCTAACCAAGACTATAGACTGGAATTTGACTCGACTGGTATTAACGTAGAAGCTATTATTTTTGGTGAAGCGTTCGAGGATAAAGACCTTCTTACCGTTCGTTGGTTCAACAACAACATCGGTACTACTATGGATATCAATGATATCATGGCAGAAACCGATCATGTGTATATGAATGCGGAGCAATTAGTAACTCTAAAAAATCGCATTGAATACACTAACTATGATGAACCGAATCAGAAAAATATGCGTCCTGTCGCTGATGATGTTATGATTAAAGTCAATAACATTGCAGCATTCTTTGACGTAATTTATCCGATTGGTACTATCTACGAAAACGCCCATAACCATGCAAACCCTGCCGATTACATGGGATTTGGTGTATGGAAGCTTTACTCTCAGGGTCGTGTTACTGCGGGTTGGAATAATGATTCATCTGACCCTTATTTTGCGCGTAACAATAATAACCTAAACGAAAACGGGCAACCATCGTTAACAGCAGGTGGAACAGTTGGTGATTTGACATTTACATTAGGAAAAGAACACATTCCTGAGTTAATGTCAAGGGACAAAGTTCTAATTTCAGACCCTGAACATGGCAGCGTAGTTATTGGCGGATGTCAATTAGACCCAGACGCACAAGGGCCAGGTTATTCTAAATACCGTGAAGACACTGTTGCAGTAAACAATGGTGTAGTTCCAAATGACATCACTAAAATTCAGCCAACAATCACCGTTTATCGTTGGATTAGGGTAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f21f23e7778a0a6e1e1150e27d412642693c6504c99f206001f286f6759d8ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Environmental Klebsiella pneumoniae and Klebsiella oxytoca bacteriophages and their therapeutic applications Weber-Dabrowska,B., Zaczek,M., Lusiak-Szelachowska,M., Laczmanski,L., Owczarek,B., Orwat,F., Lodej,N., Kaszowska,M., Gorski,A. and Lobocka,M. — — GenBank