Protein

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Genbank accession
YP_009855968.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MADLKAGTTIGGAIAWHQGNFPLKAVTDDVYYKDYKIYTTYNKPQAIDNDFVSKAQGGAYLKSVDFIEGLNILDNTGYKIKIGINNAGSSPMHAYSASIRIKDSLAIETDSGQPFILFDPSTDMAKARLTVMGNILARYINDESGRVFSPGNPPTPTDVSLGNVTNDAQVKVAFTGLQTMAGPLASPNLISLNPASLPEHVPRLSQVIVKGTIIDFGTF
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23489,37340 Da
isoelectric point:5,87297
aromaticity:0,08676
hydropathy:-0,09726

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009855968.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9459
Central domain 74 208 136 0,1564
C-terminal 209 219 10 0,1228
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_EclM_CIP9
[NCBI] 		2696340 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kanagawavirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009855968.1 [NCBI]
Genbank nucleotide accession
NC_048849 [NCBI]
CDS location
range 49494 -> 50153
strand +
CDS
ATGGCCGATTTAAAAGCTGGCACTACTATAGGTGGAGCGATTGCCTGGCACCAAGGCAACTTCCCTCTAAAGGCAGTTACAGATGACGTCTATTACAAAGACTATAAAATTTATACGACTTACAATAAACCTCAGGCTATAGATAACGATTTCGTTTCTAAAGCTCAAGGTGGTGCTTATTTAAAGTCCGTCGATTTTATTGAAGGGTTAAATATACTTGATAACACTGGATATAAAATAAAAATTGGAATAAACAATGCAGGCTCTTCACCTATGCATGCTTATTCTGCTTCTATTAGAATTAAAGATTCACTTGCAATCGAAACTGATTCAGGACAACCATTTATTTTATTTGACCCTAGTACTGATATGGCTAAAGCCAGATTAACAGTAATGGGGAATATTTTAGCAAGATATATTAATGACGAGAGTGGACGCGTATTCTCTCCAGGGAACCCTCCTACTCCAACTGATGTATCACTTGGCAATGTCACGAACGACGCCCAGGTTAAGGTAGCCTTTACAGGATTACAAACTATGGCAGGTCCTTTGGCTTCACCTAATTTAATTTCATTGAACCCGGCTTCTTTGCCAGAACATGTACCTCGTCTTTCTCAGGTTATTGTTAAGGGTACAATTATCGACTTTGGAACTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3377e5502eac0a5a0c37f3a0fca0ce37922f65b8bfe09a24d774f5a3db437749
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2625
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the Enterobacter Phage vB_EclM_CIP9 Wang,K., Tamayo,M.G., Penner,T.V., Cook,B.W.M., Court,D.A. and Theriault,S.S. 2020 — GenBank