Protein

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Genbank accession
XSG66980.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDVEHSVVIPETYEMVTDSNGEFTMDLEAATSAYRVTAVGGDDEYEDDPCSQYTFTFYVPVSDDPIYVQELILMPPPNNLPWDEEAMNKISQAVVDARNARDDAEESAVRAEAQVGLAAEQVELAKDQVDLAKAEVTKATEQVGLAKEEVTKATAQADRSKAEADRSSTQATAAAASAAQAKNEADRARELADGVAEKVEGGSLPPLVGMNETFTYEGTDPYMWESSGPIWRSSEDGVLFVAKTDGSNSRAFLRKDAEFPDGHWIVYLRIRTQNGLPGQNRCAQIRLMEEDNKECSLYFNLGTDNFPTPGVITMQYGYEGASDRTVASMFSPVNTELWMDLAIKYDAVNRHVELFRRLPNATWEKGEGRLMVDALKPVAIEVSSFPVSPKDWWLHLDYISVCKPNLICYGDSIAAGQNEYGVTRGTEDYHSHRNWAGTWFAKAPLYATNRNNLVLVQGVEGRRTWQYLSHLSEISGSGVKVVFLHASTNDVYEPSMTQSKRTSDTQAIVDQLHAVGAQVVLFNSMQGTKAYNDASTGAVKLRDYTDTWWSTELPKVTGLAQTLDIARLLAKDGYMDPVLAADDGLHLTDAAAQKIAAKLGQFFSNSSDTNGFAPLDSPTFTGIPTVPTQTPLLPFGKTIANTEYVVTFLQEWTSRYGYGELSMASHTGAQLSGSGVRSGYYHVPAGSGNPLPGDLSSALAFVDHKSYDTNKGWQLWNPAYTGRLFIRTTNASGVWQTPVELTTFTWLDANNFTKPRTLKFMELPVFNPTGSPTLSGFVPIQDSVDGGWRNLSATPTGVALLGAASAGGALNYIGGMPITNQTLPDNNIDNAASNGFQMVPNGTSGLPLNIGDINGHSAITAVFDASIKYQLLFPRTTGVEPYSNSVFYRARLDNGWESWVRLLASNQLEGNVTNDLLTSAVFQSNGNNSLNVGRSVRLANGTQIVSATVRLTFASEGILNYSYTYPMGFIEPPAVIVQLIEGPGTEINGMPVSAVMGPFTYNIANGNVLLQCFRVVGYTDTDFVSNSFINCSVVAIGRWK
Physico‐chemical
properties
protein length:1071 AA
molecular weight: 116720,98560 Da
isoelectric point:4,82554
aromaticity:0,09617
hydropathy:-0,26200

Domains

Domains [InterPro]
DC_0617
ATT
1–66
DC_0617 DC_2023 DC_0711
Coil
Unmapped
118–145
Coil Coil Coil IPR036514
SSF52266
STR
434–632
SSF52266
cd00229
ENZ
437–633
cd00229
IPR013830
ENZ
439–624
IPR013830
XSG66980.1
1 1071
Architecture
ATT
ATT
STR
ATT 1-66 | ATT 95-357 | STR 385-1069 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSG66980.1
1 1071
Domain Start End Length (AA) Confidence
N-terminal 1 237 237 0,9963
Central domain 238 483 247 0,6102
C-terminal 484 1071 587 0,7199
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-237
Central
238-483
C-terminal
484-1071

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phPLST
[NCBI] 		3417224 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSG66980.1 [NCBI]
Genbank nucleotide accession
PV539788.1 [NCBI]
CDS location
range 36790 -> 40005
strand +
CDS
ATGACTACCAAGGTGATCTTCACCTTCCATAGCCCGGACGGCAGCCCACAGGCGAACGAAAAGTTCACCGTGCGTCTCACTCGTCCGGGCATGAGCGACGTAGAGCACTCCGTCGTTATCCCCGAAACCTATGAGATGGTGACTGACTCCAACGGCGAGTTCACCATGGACCTGGAAGCGGCTACCTCCGCCTACCGAGTCACTGCTGTAGGCGGTGATGACGAGTACGAGGATGACCCCTGCTCGCAGTACACCTTCACCTTCTACGTACCTGTATCGGATGACCCGATCTACGTACAAGAACTGATCCTGATGCCTCCTCCCAACAACTTGCCGTGGGACGAGGAAGCCATGAACAAGATCTCCCAAGCAGTGGTCGATGCTCGCAATGCACGAGACGATGCCGAAGAGTCTGCTGTCCGTGCAGAGGCTCAGGTAGGTCTGGCTGCCGAGCAAGTGGAACTGGCGAAGGATCAAGTGGATCTCGCCAAAGCCGAGGTAACCAAGGCAACTGAGCAGGTTGGTTTGGCCAAAGAAGAAGTCACCAAGGCTACCGCCCAGGCTGACCGTTCCAAGGCAGAAGCTGATCGTTCCTCCACTCAAGCTACTGCTGCGGCTGCCTCTGCTGCCCAAGCCAAGAACGAAGCTGATCGTGCTCGGGAATTAGCGGATGGCGTCGCGGAGAAGGTAGAGGGTGGATCTCTCCCGCCTCTGGTGGGTATGAACGAAACCTTCACCTACGAGGGTACTGATCCCTACATGTGGGAATCCTCTGGTCCCATCTGGCGATCCTCTGAGGATGGCGTACTCTTTGTTGCCAAAACTGACGGGAGCAATTCTCGGGCTTTCCTGCGTAAAGATGCCGAATTCCCAGATGGTCACTGGATTGTCTACCTTCGTATTCGTACGCAGAACGGCCTGCCGGGCCAGAACCGGTGTGCTCAAATCCGGCTCATGGAAGAAGACAACAAAGAGTGCTCTCTCTATTTCAACCTCGGTACGGATAACTTTCCTACTCCGGGTGTGATCACCATGCAATATGGCTATGAAGGTGCCAGTGACCGCACCGTGGCCAGCATGTTCTCTCCAGTGAACACTGAGCTTTGGATGGATCTGGCCATCAAGTACGATGCAGTCAACCGTCATGTTGAACTCTTCCGTCGTCTCCCTAATGCCACCTGGGAAAAAGGCGAAGGTCGTCTCATGGTGGATGCTCTCAAGCCTGTGGCTATCGAAGTATCCTCGTTCCCCGTTTCGCCAAAAGACTGGTGGCTGCACCTTGACTACATCTCGGTGTGTAAGCCGAACCTTATCTGCTACGGCGACAGCATCGCTGCTGGTCAGAACGAGTACGGTGTTACTCGTGGTACTGAGGACTACCACAGCCACCGCAACTGGGCTGGTACTTGGTTCGCCAAGGCTCCGTTGTACGCTACGAACCGGAACAACTTGGTTCTGGTACAGGGTGTGGAAGGCCGTCGTACCTGGCAATACCTGAGCCATCTGAGTGAGATCAGTGGTTCCGGCGTCAAGGTGGTCTTCCTGCATGCCAGCACGAATGACGTGTATGAACCCTCTATGACTCAGTCCAAGCGGACCTCGGATACCCAAGCCATCGTAGACCAGCTTCATGCTGTCGGTGCCCAGGTAGTCCTGTTCAACTCCATGCAGGGAACCAAGGCGTACAACGATGCCTCGACTGGTGCGGTCAAGCTTCGTGACTACACCGATACGTGGTGGAGCACTGAGCTTCCCAAGGTCACTGGTTTGGCTCAGACTCTGGACATCGCACGCCTTCTCGCCAAGGACGGGTACATGGACCCCGTCCTTGCTGCTGATGATGGCTTGCACCTGACGGATGCCGCTGCTCAGAAGATCGCTGCCAAGTTGGGTCAGTTCTTCTCCAACTCCAGTGATACCAATGGTTTCGCTCCGTTGGATAGCCCTACCTTCACTGGCATTCCGACCGTTCCGACGCAGACTCCACTCCTGCCGTTCGGCAAGACCATTGCCAACACCGAGTACGTGGTCACTTTCCTCCAGGAGTGGACCAGCCGGTATGGCTATGGCGAACTGTCTATGGCTAGCCATACTGGTGCTCAGCTGTCCGGTTCCGGTGTCCGCAGCGGCTACTACCATGTACCTGCTGGTTCGGGTAACCCTCTCCCGGGCGATCTGAGCAGTGCTCTGGCTTTCGTAGACCACAAGTCTTATGACACCAACAAGGGATGGCAGCTGTGGAACCCGGCCTATACTGGTCGTCTGTTCATACGTACGACTAATGCTTCGGGTGTCTGGCAGACTCCGGTAGAACTGACAACCTTCACTTGGTTGGATGCGAACAACTTCACCAAGCCACGAACCCTGAAGTTCATGGAACTGCCGGTGTTCAATCCTACTGGTAGCCCTACCCTGTCTGGCTTCGTCCCGATCCAGGACAGTGTAGATGGTGGCTGGCGTAACCTCTCTGCCACTCCTACTGGTGTGGCCCTGCTGGGTGCAGCTTCGGCAGGTGGAGCACTCAACTACATCGGTGGTATGCCCATCACAAACCAGACTCTGCCCGACAACAACATCGATAACGCAGCCAGCAATGGCTTCCAAATGGTTCCCAATGGAACCTCTGGGTTGCCTTTGAACATAGGCGACATCAATGGACACTCCGCCATTACTGCGGTGTTCGATGCCTCCATTAAGTACCAGCTGCTGTTCCCCCGCACTACTGGAGTAGAGCCTTACTCCAATTCTGTGTTCTATCGCGCACGGTTGGACAATGGATGGGAAAGTTGGGTTCGTCTTCTCGCCTCCAACCAGCTGGAAGGTAACGTAACCAACGACCTGCTCACCTCTGCTGTATTCCAGAGCAACGGTAACAACAGCCTTAACGTAGGTCGGTCTGTACGTTTGGCCAATGGTACTCAGATTGTCTCTGCTACCGTTCGGCTTACCTTTGCCTCTGAAGGTATTCTGAACTACTCGTACACCTATCCTATGGGCTTTATCGAGCCGCCCGCTGTGATCGTGCAGCTCATTGAAGGTCCAGGGACAGAGATCAATGGAATGCCCGTCTCTGCGGTTATGGGACCGTTCACGTATAACATAGCGAATGGGAACGTTTTGCTGCAGTGCTTCCGCGTTGTTGGTTATACTGACACTGATTTTGTCAGCAACTCCTTCATCAACTGCTCTGTAGTAGCAATAGGACGGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
655b62c2192c95f761405e76cfec44af95884b873914d96e085865afe70661ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Complete Genome of phage phPLST Vukotic,G., Obradovic,M., Zrelovs,N., Matijasevic,D., Kojic,M., Mutabdzija,J., Plackic,N. and Stanisavljevic,N. — — GenBank