Protein

View in Explore
Genbank accession
XXQ04796.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAYSWSETQQTAGDTDVVVDIEYLDRSYIYVYFEGELIPSSGYTWASDQLIKLNTPLATDGEVLVVRRTDREFLYIAFAEGAAFIRENIDTQNKQFLHLAQELVEGRSIEGFYGDLSMNGFRITNLGAGVEPGDAINKGQLDAVDTRVAALENSYTGITTVSYPWYSVLLSSTDTLVPGYTFDKASVYINGVCQVPDYSYIVVDNTIVLADPVPAGTIVFARLGEDTDSATDLATASALAAVQADLQGKLNITNDNVTALSGTVSGHTTSIGTINGQISTLNNQVTSLGSSKAAAGANSDITSLSGLTTALSLAQGGTGATSASGARTSLGLSSVALGGTAATGTADTATFNADTTLTFSATYSQAEHTTAAAWIKRIAQRVLLLETALRSNVQKV
Physico‐chemical
properties
protein length:396 AA
molecular weight: 41650,66330 Da
isoelectric point:4,36480
aromaticity:0,07828
hydropathy:0,04697

Domains

Domains [InterPro]
DC_1609
STR
1–392
DC_1609
IPR005604
ATT
3–104
IPR005604 IPR011049 G3DSA:1.20.5.340 G3DSA:6.10.140.940
IPR008635
RBD
122–158
IPR008635
XXQ04796.1
1 396
Architecture
ATT
STR
ATT 1-104 | STR 105-392 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage Peggy
[NCBI] 		3442625 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXQ04796.1 [NCBI]
Genbank nucleotide accession
PV796109.1 [NCBI]
CDS location
range 35657 -> 36847
strand +
CDS
ATGGCCTACTCTTGGAGTGAGACCCAGCAGACCGCTGGGGACACTGACGTAGTAGTGGACATTGAGTATCTGGACCGCAGCTATATCTATGTGTACTTCGAGGGGGAGTTAATCCCCTCCTCGGGGTATACGTGGGCAAGCGACCAGTTAATCAAACTGAATACACCACTGGCTACGGACGGTGAGGTACTGGTAGTTCGACGCACAGATAGAGAGTTCCTGTATATCGCCTTTGCTGAGGGCGCTGCCTTCATCAGGGAGAATATTGATACCCAGAATAAGCAGTTCCTGCACTTGGCACAGGAACTGGTGGAGGGCCGTAGTATTGAAGGTTTCTACGGAGACCTGAGTATGAACGGATTCCGCATCACTAATCTTGGCGCTGGGGTAGAGCCCGGGGACGCTATCAACAAAGGACAGCTGGATGCGGTGGATACACGTGTAGCTGCTCTGGAGAACAGCTATACCGGCATTACCACTGTAAGCTATCCCTGGTATTCCGTGTTACTATCAAGTACAGACACCCTGGTACCTGGATACACCTTTGATAAGGCAAGTGTGTACATTAATGGGGTGTGTCAGGTTCCTGATTACAGCTACATTGTAGTTGACAACACCATCGTACTGGCCGACCCGGTTCCTGCTGGAACCATAGTGTTCGCCCGACTTGGTGAAGACACTGACTCCGCTACGGACCTGGCTACCGCCAGCGCACTGGCAGCAGTGCAGGCGGACCTGCAGGGTAAGCTGAATATCACCAACGATAATGTTACGGCTTTGTCCGGCACGGTATCGGGGCATACTACGAGTATCGGCACTATCAACGGGCAGATATCAACCCTGAACAATCAGGTTACTTCTCTGGGCAGCAGCAAAGCGGCTGCGGGGGCCAATTCGGACATTACCAGTCTAAGCGGCCTTACTACTGCTCTGAGCTTGGCTCAGGGCGGCACGGGCGCTACGAGTGCCTCCGGAGCACGTACTAGCCTGGGCTTATCCAGTGTAGCCTTGGGAGGTACTGCGGCTACCGGCACAGCAGATACTGCGACATTTAACGCAGACACAACCTTAACCTTTAGCGCAACCTACTCGCAAGCAGAACACACTACGGCAGCAGCGTGGATTAAGCGCATTGCGCAGCGTGTGCTTCTGCTAGAGACAGCTCTGCGCAGCAACGTACAGAAGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34bb7b96d7b6759c74dcd5821e1e01d058ff7aa94cb87264cf0ecba30b34ef13
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7780
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new Cronobacter phage Lone,A., Kropinski,A.M. and Anany,H. 2020-07-22 — GenBank