Protein

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Genbank accession
YP_010582095.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MSIATGQITLTDYNDAITLTGFITANSPRMQQYNPDNETFNPDWTKNPLILTASLYVMGDTNNIISSNDVQKVEWFDAANPGTPLTTGGPYSVNRETLTIKQNILSTKPAVDFICQVTYRDSTSMLDILTKMSISLSRVTNGSGITSASVWMPNGNIFKNDQIAALIAECDLWRGGVVDNTNVAYQWYNQDPSITTDQGGGLGWRKLTDSTNSGETGYTTRQLTVPASAVPSFEVYKCIVTDLDTASNTYNETFQGTAAFIDQSDPIQMSITSTGGDVFKNGVGSSDLTAHMFRAGDEIDEDGKEYTYKWYKYDKDGVLVTGFGGTNNYKTGKTITVSSDDVDTKATFLCETSAAVGQFTVYDITDVIVSATEPANPVNGTIWLNTSGQPPYRFYMYKDGVWETTDYDSLESLDPDSYDKVRDAYNAITDLDMDNRLTRYERSVVRGELANIIGTYLSSTAAMPTIEEVDASGVGALYSIRQQARDIGVSTSNTNYVRLGTAYTALRTYLSGLAIKPWDVDSDGTLDIVSEDWDNAWKDYYLAYNFLGITVTNRQKEYSDLVGEGAVQDAIKAVSNSAQFKEAPIANPMNINAPIASLGLPSFQGRHVDVWSMSPDAQANWALGGNRIKPITNPTFSSAGSVEIIGKFYGDGTNNDEFSWDKEGRPVKTTRWVDVSLDDSFTWVFGVDGTGYKQVTVPAFSAIAPVDMSVSAVKHNGNVLTTIGDTLTAADQVMLKNADSVLNITVADTDSGWGETYTPEPAEILAYFNGWKMCNGTFDQPYDGTGTKVWYPIGDSDLSRATNSNGTANPVPTDVSPTIKEQSINLYQIVYRNDTAVQETIQFDGILSLLEGDNEVQITYPVDTPEITTGTIKYATNLATVTDNLKYWIPTLQQRVSKAEEVITDDAIINTVTQSTQYQLTLASKADTDALADYATNADLDDLSGDIDGRINNAINAIDFSPYATKSELEQKATDITAKFQAAGGMNLIKNSIGFADLDFWGWFTDYPVETISTNELDILGFGSGFLYNPDGHNKGITQEINVIPGQPYTLSWYLNKRTSGPDSSYRFWIQILENDVVTLQVADNSAKTTVGYESSYMTYTPQSDVMQVKFIGYANVDATLTGVMLTIGDVPLKWSLSTGEVYNTNIRMNINGIRVSQLDANRQEIGFTQITPKEFAGYYDTEGNGSFQKVFYLNGDETVTRKLRATDSIVMQDIQIINVDTADRKGWAFIPNIDTE
Physico‐chemical
properties
protein length:1237 AA
molecular weight: 135792,69100 Da
isoelectric point:4,29989
aromaticity:0,10186
hydropathy:-0,32773

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010582095.1
1 1237
Domain Start End Length (AA) Confidence
N-terminal 1 993 993 0,8698
Central domain 994 1226 234 0,3704
C-terminal 1227 1237 10 0,1642
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-993
Central
994-1226
C-terminal
1227-1237

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SPG24
[NCBI] 		1497851 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010582095.1 [NCBI]
Genbank nucleotide accession
NC_030903 [NCBI]
CDS location
range 135214 -> 138927
strand +
CDS
ATGTCTATTGCAACAGGACAGATTACATTAACGGACTACAATGACGCTATCACACTCACAGGTTTTATTACAGCTAACAGCCCGAGGATGCAGCAGTATAATCCAGATAATGAAACGTTCAACCCAGACTGGACTAAGAATCCGTTAATTTTAACAGCCTCTCTTTATGTGATGGGAGATACAAATAACATCATCTCAAGTAATGATGTTCAAAAAGTTGAGTGGTTTGATGCGGCTAATCCGGGGACACCTCTGACAACGGGAGGACCTTATAGTGTAAACCGTGAGACCCTCACTATTAAACAAAACATCCTTTCAACGAAGCCAGCTGTAGATTTTATATGCCAAGTTACATACCGAGATAGTACCTCTATGTTGGATATCTTGACAAAAATGAGTATCTCATTGAGCCGGGTAACCAACGGTAGCGGCATCACATCTGCCTCTGTATGGATGCCAAACGGTAATATATTCAAGAACGACCAGATAGCTGCCCTTATCGCAGAGTGCGATTTATGGAGAGGTGGGGTAGTAGACAACACAAACGTAGCGTACCAGTGGTACAACCAAGACCCGTCTATCACAACAGATCAAGGCGGGGGTCTAGGCTGGAGAAAACTTACTGATAGTACCAACAGCGGCGAGACTGGGTACACTACAAGGCAGCTTACTGTCCCGGCAAGTGCTGTCCCTAGTTTCGAAGTATACAAGTGTATCGTAACTGATCTGGACACGGCGAGCAATACATACAACGAAACCTTTCAAGGAACTGCTGCCTTTATTGACCAGTCTGACCCGATCCAAATGTCAATCACATCTACAGGAGGAGACGTATTCAAAAATGGGGTGGGTTCCTCAGACCTAACTGCTCATATGTTCCGTGCAGGTGACGAGATAGATGAAGATGGTAAAGAGTATACATACAAATGGTATAAGTACGATAAGGACGGAGTTCTTGTAACAGGGTTTGGTGGTACAAACAACTACAAGACTGGAAAAACGATCACGGTAAGCAGCGATGACGTAGACACTAAGGCAACCTTCCTATGTGAAACATCCGCAGCAGTAGGTCAATTCACTGTATACGACATTACAGATGTGATTGTGAGCGCTACTGAGCCAGCAAATCCTGTTAATGGGACTATCTGGCTTAACACTTCTGGGCAGCCTCCATACCGTTTCTACATGTACAAAGATGGTGTCTGGGAGACTACAGACTATGATAGCTTAGAATCCCTAGACCCAGATTCATATGACAAAGTAAGAGACGCATATAATGCGATCACCGATCTCGATATGGATAACCGCTTAACAAGGTATGAGCGCAGCGTAGTCCGGGGAGAGCTGGCAAACATTATCGGTACATATCTGAGCAGTACAGCTGCTATGCCAACCATTGAGGAAGTGGATGCCAGTGGAGTAGGTGCGTTATACTCTATTCGGCAACAGGCTAGGGACATTGGGGTCTCCACTTCAAACACTAACTATGTACGGCTAGGCACTGCTTACACAGCGCTCCGAACATACCTATCAGGATTAGCGATAAAGCCGTGGGACGTAGACTCGGATGGAACTCTGGATATTGTAAGCGAGGACTGGGATAACGCATGGAAAGACTACTATTTAGCGTATAACTTCCTTGGGATTACTGTTACAAACAGACAGAAAGAGTATTCCGATCTCGTGGGGGAAGGCGCTGTCCAAGATGCGATTAAAGCAGTAAGCAACTCCGCTCAGTTTAAAGAGGCACCGATAGCTAATCCAATGAACATCAATGCACCGATCGCAAGTCTGGGTCTCCCTTCCTTCCAAGGTCGTCATGTAGACGTATGGTCCATGTCCCCAGACGCACAGGCTAACTGGGCATTAGGAGGTAACAGGATAAAGCCAATCACAAATCCTACGTTTAGTTCCGCAGGTTCGGTAGAAATCATCGGTAAGTTTTATGGAGACGGTACAAACAACGATGAGTTCTCATGGGATAAAGAAGGGCGTCCGGTAAAAACAACTCGTTGGGTGGATGTATCTTTAGACGACTCCTTCACTTGGGTGTTTGGAGTAGACGGAACAGGGTATAAGCAGGTAACTGTTCCTGCGTTCTCTGCGATAGCCCCAGTAGATATGTCAGTATCGGCAGTCAAACATAACGGAAATGTCCTAACCACTATTGGAGACACCCTTACAGCAGCAGATCAGGTCATGCTTAAGAACGCTGATAGTGTCCTCAATATTACTGTAGCGGACACGGACAGTGGGTGGGGCGAGACTTATACCCCAGAACCAGCAGAGATTCTCGCATACTTTAACGGGTGGAAAATGTGTAACGGCACCTTCGATCAGCCTTATGACGGTACAGGTACAAAAGTGTGGTACCCGATTGGAGACTCAGACCTTTCCCGGGCTACTAACTCCAACGGAACCGCCAACCCAGTACCTACCGATGTATCCCCTACTATAAAGGAACAGTCGATAAATCTATATCAGATTGTATACCGAAACGACACAGCTGTTCAAGAGACCATTCAGTTTGACGGTATCCTGTCCTTGTTAGAAGGTGATAATGAAGTACAAATTACATACCCAGTAGACACACCGGAGATCACAACCGGAACCATTAAATATGCAACAAACCTAGCTACTGTAACGGACAATCTGAAATACTGGATTCCTACTCTTCAACAGCGAGTATCCAAAGCCGAGGAAGTTATCACGGATGACGCCATCATCAACACAGTAACACAGTCCACACAGTACCAATTAACCTTAGCTAGTAAAGCGGATACAGATGCACTGGCGGACTACGCAACAAACGCTGACCTAGACGATCTATCTGGAGACATTGATGGAAGAATTAACAACGCCATCAATGCTATCGACTTTAGCCCATATGCAACAAAGTCGGAGTTAGAGCAGAAAGCTACAGACATCACAGCGAAGTTCCAAGCTGCGGGTGGTATGAACCTAATTAAAAACTCTATCGGTTTTGCTGATTTAGACTTCTGGGGATGGTTTACCGACTACCCTGTAGAGACGATTAGTACAAATGAGCTAGATATCCTTGGGTTTGGTAGTGGGTTCCTTTATAATCCAGATGGTCACAACAAAGGAATTACACAAGAAATTAATGTTATTCCGGGGCAGCCATACACCCTGTCTTGGTATCTAAATAAGAGAACGAGTGGACCTGATTCATCTTATAGATTCTGGATTCAAATACTTGAAAATGACGTGGTAACCCTTCAGGTAGCGGACAATAGTGCAAAGACTACTGTAGGATACGAATCCAGTTACATGACCTATACTCCTCAATCAGACGTTATGCAGGTGAAATTTATCGGGTATGCGAATGTTGATGCAACTCTTACAGGTGTCATGCTGACAATCGGTGATGTTCCATTGAAGTGGTCTCTTTCAACTGGAGAGGTGTATAACACGAATATTCGTATGAACATTAACGGTATTCGAGTATCGCAGTTAGACGCTAATCGACAGGAAATCGGGTTCACTCAAATCACCCCGAAGGAATTCGCAGGATATTACGATACAGAAGGAAATGGCTCTTTTCAGAAGGTATTCTACTTAAACGGGGACGAAACGGTCACTAGAAAGCTGAGGGCTACCGATTCAATTGTTATGCAAGATATCCAGATCATTAATGTCGATACAGCCGATAGGAAAGGGTGGGCGTTTATTCCGAATATTGACACGGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f110e82ea8e31fd3bd96a89e5a2029ce5e5d8cd90c0afa958a39937eb3d024db
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2765
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome of SPG24 was analyzed in behalf of its correct identification and originality Lee,O.H. 2021-03 — GenBank