Protein

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Genbank accession
YP_009845355.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVEAAAGSAAAAKDSEIAAKDSENKAKDSEIQAGIHADASEASATQSAASAAESERQANLSQGSAENSAASALESKNFKDASELAAQNAEQSKILAEQAQRAAEAAQSGAQASENKASAFATQAAASSASAGDFAAAAKQSELNAKTSETNAATSEVEAETQAETATTGANRAKAEADRAAQIVDSKLDKEDISGFIKVYKTKEEADTDVSSRVLGEKILVWNQTDSKYGWYKVAGTAETPVLELVETEQKLVSINNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVTEEQWQAGATLYFSTGNGTTTFRLPDMMQGQAFRAAAKGEENAGNIKEQIPYITMINGKAPADDGTITLGNAADKNVWNGVDGEVLLRGAFGLGGAGLILNEPDAVSFFKAMRAFGSGYYRNDSESNPVIPKYSAGFYSKTADTHTFICSAYGNGVTFVATVNDALLDGENPTVHTNILYGTANKPDLNTDTQGVLGIEKGGTGSNTQKGARLNLDTPVGSRAIGMPNNSDVLAFMKSSAESGYYSSGSIVTGVPEIAGWYMFDLHVHGRNASGEMDHGNVYCTTDVGAIWYTLMWAGVWQPWRRLTTEHGIIPITSGGTGTNNANDARINLGLGPANAPTFSGLTLPGTNGVNSGIAVFSNRNSDGTQLSYSRMYHEIQNGIGKTTIQTTREGGATNYFQIDEYGNVGNVNSIITSAYLGIGTASALGGKSIVLGDSDTGLQWVSDGIIKAIANSAQIFAWTPSSIDTYMTISSHVDNSARGLYVNGIRTTGASALVAGVVEAGSHVGWRDRASGMLVELNTRGAAANIWKATRWGDQHAGASDIVIYDDGSPYYRTLVGGGEFGFNGLGQATCTSWISTSDIRLKAQLKEIVSAKDKVKSLQGYTYFKRNSLVEDEHSFYCEEAGLIAQDVQTVLPEAVYKIANSDLLGVNYSGVTALLANAVKEMLADAEAQEARISNLEEELAELKALVATLVNK
Physico‐chemical
properties
protein length:1071 AA
molecular weight: 112860,45260 Da
isoelectric point:4,75739
aromaticity:0,07376
hydropathy:-0,25285

Domains

Domains [InterPro]
DC_0608
ATT
2–565
DC_0608 DC_1093 DC_1942
Coil
Unmapped
142–162
Coil DC_1942 IPR030392
IPR030392
CHP
954–1014
IPR030392 Coil
YP_009845355.1
1 1071
Architecture
ATT
STR
ATT
ATT 2-565 | STR 607-745 | ATT 746-1071
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009845355.1
1 1071
Domain Start End Length (AA) Confidence
N-terminal 1 447 447 0,9469
Central domain 448 646 200 0,1813
C-terminal 647 1071 424 0,7824
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-447
Central
448-646
C-terminal
647-1071

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sepoy
[NCBI] 		2565517 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus Sds2
Host Salmonella enterica subsp. enterica serovar Heidelberg
[NCBI] 		611 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009845355.1 [NCBI]
Genbank nucleotide accession
NC_048760.1 [NCBI]
CDS location
range 86545 -> 89760
strand -
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAGTATACAGTAGTTTTAGGTAATTCTATTAGTTCTATTACTGCTGGTGAACTAACAGCGGCTGTTGAGGCCGCTGCAGGATCTGCTGCTGCTGCTAAAGACTCTGAAATAGCAGCTAAAGATTCTGAGAATAAAGCTAAAGATTCAGAAATTCAAGCAGGTATTCATGCTGATGCTTCTGAGGCTTCAGCAACCCAATCTGCTGCTTCTGCTGCTGAATCTGAAAGACAAGCTAACTTATCTCAAGGTAGTGCGGAAAATTCTGCTGCGTCTGCTTTAGAATCTAAGAATTTTAAAGATGCTTCAGAACTTGCTGCTCAAAATGCAGAGCAGAGTAAGATTTTAGCAGAGCAAGCCCAAAGAGCGGCAGAAGCTGCCCAGTCTGGTGCTCAAGCTTCTGAAAATAAAGCATCAGCATTTGCTACACAAGCTGCTGCATCTTCAGCTTCCGCAGGAGATTTTGCTGCAGCCGCTAAACAATCTGAATTAAATGCTAAAACTTCTGAAACCAATGCCGCAACATCAGAAGTGGAAGCGGAAACCCAAGCTGAAACTGCTACTACTGGGGCAAATCGTGCTAAGGCTGAAGCCGATCGCGCAGCTCAGATTGTAGATAGTAAGTTGGATAAAGAAGATATATCTGGCTTTATCAAAGTCTACAAGACCAAAGAAGAAGCGGATACTGACGTTAGTAGTCGCGTACTAGGTGAAAAGATCCTAGTGTGGAACCAAACCGACTCAAAATATGGGTGGTACAAAGTAGCTGGAACTGCTGAGACTCCAGTATTAGAGTTAGTAGAGACAGAGCAAAAGCTAGTTTCTATTAACAACGTTCGTGCAGATGACGCAGGTAACGTACAGATTACTCTTCCTGGTGGTAACCCCTCTTTATGGCTGGGTGAAGTTACTTGGTTCCCTTATGATAAAGATTCAGGTGTTGGCTACCCTGGTGTTCTTCCTGCTGATGGTCGTGAAGTTCTTCGTGTAGATTATCCAGATACTTGGGAAGCTATCGAGGCTGGCTTAATCCCTTCTGTTACTGAAGAACAATGGCAGGCTGGTGCAACTCTCTATTTCTCCACTGGTAATGGTACTACTACTTTCCGTCTACCTGATATGATGCAGGGGCAGGCATTCCGTGCTGCTGCAAAAGGCGAGGAAAACGCTGGCAATATTAAAGAGCAAATTCCGTACATTACTATGATTAACGGTAAAGCTCCTGCTGACGATGGTACAATTACTTTAGGTAATGCTGCAGATAAAAACGTATGGAATGGTGTTGATGGTGAGGTATTACTAAGAGGTGCTTTTGGTCTTGGTGGTGCTGGTTTAATCCTTAATGAACCTGATGCTGTTTCCTTCTTCAAAGCAATGCGTGCTTTTGGTTCCGGGTACTATAGAAATGACTCTGAGAGTAATCCAGTGATTCCTAAGTATTCCGCAGGATTCTACTCCAAAACTGCTGACACCCATACCTTTATCTGTTCTGCTTATGGTAATGGTGTTACTTTTGTAGCTACTGTAAATGATGCATTATTAGATGGGGAAAATCCTACAGTACATACTAATATTCTTTATGGCACAGCTAATAAACCTGATCTGAATACTGATACTCAAGGAGTTTTAGGAATAGAGAAGGGTGGTACTGGCTCCAATACTCAAAAAGGTGCTAGATTAAATCTGGATACTCCTGTAGGCAGCAGAGCTATTGGAATGCCTAATAACTCTGATGTACTAGCTTTCATGAAATCTTCCGCAGAAAGCGGGTATTACTCCTCGGGTAGTATAGTTACTGGAGTTCCAGAAATTGCTGGATGGTACATGTTCGATCTCCATGTACATGGTAGGAATGCCTCTGGAGAGATGGATCACGGTAATGTATATTGTACAACAGATGTAGGTGCTATTTGGTATACTCTAATGTGGGCTGGTGTATGGCAACCGTGGAGACGTTTAACTACAGAACATGGTATTATTCCTATTACTTCAGGGGGTACTGGTACAAATAATGCAAATGACGCAAGAATAAACTTAGGTCTTGGTCCTGCAAATGCACCTACTTTTAGTGGTTTAACTCTTCCGGGTACTAATGGTGTTAACTCAGGTATAGCTGTTTTTAGTAATAGAAACTCGGATGGAACTCAGCTTTCCTACTCTAGGATGTATCACGAAATTCAGAATGGTATTGGTAAAACTACTATCCAAACTACGAGAGAGGGTGGTGCGACTAACTATTTTCAGATTGATGAGTATGGTAACGTTGGGAACGTTAATTCAATTATTACAAGTGCATATCTTGGGATTGGTACTGCTAGTGCTCTTGGTGGTAAATCCATTGTACTTGGGGATTCTGATACAGGACTACAATGGGTTAGTGATGGTATAATTAAAGCTATTGCTAATAGTGCCCAAATATTTGCTTGGACTCCTTCCTCAATAGATACATATATGACTATTAGCTCACATGTGGATAATAGTGCGAGAGGCTTGTATGTAAATGGGATTAGGACTACCGGTGCCTCCGCTCTTGTAGCTGGGGTTGTAGAAGCTGGATCTCATGTTGGTTGGAGAGATAGAGCTTCAGGTATGCTTGTTGAATTGAATACTAGAGGAGCTGCTGCCAATATCTGGAAAGCAACTAGATGGGGTGACCAACATGCTGGTGCATCTGACATCGTTATTTATGATGATGGATCTCCTTATTATAGAACTCTTGTAGGCGGTGGTGAATTTGGGTTCAATGGCCTTGGACAAGCTACCTGTACTTCTTGGATCAGTACATCTGATATTAGGCTTAAGGCACAGCTAAAAGAGATAGTATCTGCTAAAGATAAGGTAAAATCCCTACAGGGGTACACTTATTTTAAACGTAATAGTTTGGTTGAAGATGAGCATTCCTTTTATTGTGAAGAGGCAGGATTAATCGCACAGGATGTTCAAACTGTACTACCTGAAGCTGTATATAAAATAGCTAACTCAGATCTTCTCGGTGTTAATTACTCTGGTGTTACCGCATTATTGGCTAACGCAGTAAAAGAGATGTTGGCGGATGCGGAGGCTCAGGAAGCTCGTATCAGTAATCTAGAAGAAGAACTGGCAGAGTTAAAAGCTCTAGTAGCCACTCTGGTAAATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
923b9b6cca76ad1c190cd45fad6a3c519cbb87f94098ac8d4877b8d32bdae964
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50