Protein

View in Explore
Genbank accession
YP_010645661.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQIWIHDKSMRKVCALNNEIPGMLPYTNSQWHLYLEYSTSTFDFTIPKIVNGKLHDDLKYINDQMYVSFYYDNSYHVFYVSQLVENDFNFQVTCNNTNLELAREVARPLADSGGAKSVEWYLRNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKIVIDIYQRPDENHHGIGKVRGDVTLYYQTGLKDVQVSSDKTQLFNAGVFTGANGVNLDSVEFEEKNELGQVEFYSRKGTSFVFAPLSRERYPSTMNPDSADNWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPANNSVVFTNFKKLDNKPSDALQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPILKQGDKIVDATYRFVIDGTIKYSGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFVNVSDGKQGPKGDRGNDGLPGKDGVGLKSTTITYGMSDSDTIMPTNWTANPPTLIKGKYLWTKTQWTYTDSTSETGYQKTYIAKDGNNGNDGRPGKDGVGIRNTTITYAQGTSGTVAPTNGWSTQVPNVPAGQYLWTKTVWDYTDNTSETGYSVAKMGEQGPKGDRGNDGKTTYFHTAWSYSADGTDRFSTVYPNLNLLVNSSAKTKDGFFKNFDKVENGYGEVTMTGTNTWVVRNMWDGFSIKPRDYKPGDKYTMSMDVMITSWNLPAGTHLDEFWIGQRYTHGGGLYSWKRICFIELPKDPSKMLNQWIKITQTSTIPPYEDPAINTEAIFMTKFTGPSEGSFTIRIRNPKQEPGETATPYMPSASEVTTADYPSFIGHYTNYTQVDSPNPRDYTWSLIRGNDGKDGANGGENLIVNSAFPENIDGWGFWDESTPNNNLHIATHGFYYNGTKPLFRLDNNTNGVVPASTKRFPVKRNTDYSLNIQIFATGNLKSVDIYFLGRKANETDKELTKVIHLKTHTGSPSTTQTVKWHLTFNSGDCDEGFIRINNNGTTDGKTSTLFFAELDCYEGTTDRAWQASSKDLEEEIDTKADDVLTQAQLNRLNETNSIIKAELDAKASLDTLNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMAASNEGLVVGKKDKSSSIMFNPNGRISMFSAGNEVMYISKGVINIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1244 AA
molecular weight: 139767,72510 Da
isoelectric point:5,29287
aromaticity:0,11013
hydropathy:-0,59381

Domains

Domains [InterPro]
DC_0002
STR
1–606
DC_0002 IPR054563 DC_0002
IPR010572
ENZ
142–381
IPR010572 DC_1328 Coil
YP_010645661.1
1 1244
Architecture
STR
STR 1-1244
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC572
[NCBI] 		2365035 No lineage information
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010645661.1 [NCBI]
Genbank nucleotide accession
NC_070669.1 [NCBI]
CDS location
range 15028 -> 18762
strand +
CDS
ATGCAAATTTGGATTCATGATAAAAGCATGCGCAAGGTGTGCGCATTGAATAATGAAATTCCCGGAATGTTGCCATATACGAACAGTCAATGGCATTTATATCTTGAATACTCAACAAGTACGTTTGACTTCACAATTCCTAAAATTGTAAATGGCAAGCTACACGATGATTTAAAATACATCAATGACCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTATCGCAACTCGTTGAAAATGATTTTAATTTTCAAGTGACTTGTAATAACACCAACCTTGAATTGGCAAGGGAAGTTGCACGACCACTTGCAGATAGTGGCGGTGCCAAAAGTGTTGAGTGGTATCTTCGGAATCTTGAATTGCTTGGTTTTGCAGGACTTGAAATAGGTGTCAATGAAATTTCTGATAGAACAAGAACGCTTACTTTTGAATCACAAAGTGGCACAAAGCTAGAGCAACTTCATAGCTTGATGAATCAATTTGATGCAGAGTTTGTTTTTCGTACAGATTTAAACCGAGATGGTACTTTAAAAAAAATTGTCATTGACATTTACCAACGACCAGATGAAAACCATCACGGAATTGGAAAGGTTCGAGGGGATGTAACTCTTTACTATCAAACAGGATTGAAGGATGTTCAAGTATCCAGCGATAAGACTCAACTATTTAATGCTGGTGTTTTCACTGGTGCAAACGGGGTTAATCTTGATAGCGTTGAGTTTGAAGAGAAAAATGAGTTAGGACAAGTTGAGTTCTACTCTCGAAAGGGCACTAGCTTCGTTTTCGCCCCACTATCAAGGGAACGCTACCCATCTACCATGAATCCAGACAGCGCTGATAACTGGACACGTAGGGACTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTGCGTACTATCAAACAGTATGCTTATCCTCTAATGACATATACTGTCAGCGTTCAATCTAGTTTCATTGAAAACTACAAGGACATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTGCGAATAATTCAGTAGTTTTCACCAACTTTAAAAAGTTGGATAATAAACCATCGGATGCCTTGCAACAACGTATCGATGAGATTGTTTCTAAGTCATTGCCATATCATGTTGAGATAAGGACCACAAACGGTACAGTATTTAAAAACGGTATTGGTCGTTCTACCGTTAAACCAATTTTGAAGCAAGGCGATAAAATTGTTGATGCAACTTATCGATTTGTGATTGACGGTACTATTAAATACTCAGGTATGACCTATGATATGGTAGCATCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAGGGCGATAGAGGTAATGACGGCTTACCTGGTAAAGACGGGGTAGGCTTGAAATCTACCACAATCACTTACGGCATGTCTGACAGTGATACTATCATGCCTACGAATTGGACTGCAAACCCACCAACTTTGATTAAAGGGAAATACCTATGGACTAAAACTCAGTGGACGTATACTGATAGTACAAGTGAGACTGGTTATCAAAAGACTTATATTGCTAAAGATGGTAATAACGGTAATGATGGCCGTCCGGGTAAAGATGGCGTTGGTATACGTAATACCACAATCACTTACGCACAAGGAACATCTGGAACAGTAGCACCAACGAATGGTTGGAGTACTCAAGTGCCGAATGTACCTGCTGGACAATACCTATGGACTAAAACAGTCTGGGATTATACTGACAACACTAGTGAAACTGGATATTCAGTCGCTAAAATGGGCGAGCAAGGTCCAAAAGGCGACCGTGGTAATGATGGGAAGACTACATATTTTCACACAGCATGGTCTTACAGCGCAGACGGCACTGATAGGTTTAGTACTGTTTATCCAAATTTGAATCTGTTAGTTAATAGTTCAGCTAAAACCAAAGATGGGTTCTTTAAAAACTTCGACAAAGTAGAAAATGGCTACGGAGAAGTTACAATGACGGGAACTAATACATGGGTTGTTAGAAACATGTGGGATGGTTTCTCTATTAAACCTAGAGATTATAAACCCGGCGATAAGTACACAATGAGTATGGACGTTATGATCACAAGTTGGAATCTCCCTGCTGGAACACATCTTGACGAGTTTTGGATTGGTCAGCGATACACTCATGGCGGAGGATTATACTCATGGAAGCGTATTTGTTTTATTGAATTACCTAAAGACCCTAGTAAAATGCTGAACCAATGGATAAAAATAACACAAACGTCAACGATACCTCCGTATGAAGACCCCGCTATCAACACAGAAGCAATCTTTATGACTAAATTTACTGGTCCGAGTGAAGGTAGTTTCACGATAAGGATTAGAAATCCAAAACAAGAACCAGGCGAAACCGCCACTCCATACATGCCATCAGCTAGCGAAGTCACAACTGCTGACTATCCAAGTTTCATCGGACACTACACAAACTATACACAAGTAGATAGTCCTAATCCTCGAGATTACACTTGGAGTCTGATACGAGGAAACGACGGGAAGGATGGAGCAAATGGTGGAGAGAATCTAATTGTTAATTCAGCATTCCCAGAAAATATTGACGGATGGGGTTTTTGGGACGAAAGTACACCTAATAACAATCTTCATATAGCTACACATGGATTTTACTATAACGGAACAAAACCCCTTTTTAGATTAGACAATAACACCAATGGTGTGGTTCCTGCATCAACAAAACGTTTTCCAGTCAAACGCAACACTGATTATTCTCTAAATATTCAGATATTTGCAACCGGAAACCTCAAGAGCGTTGATATCTATTTTCTTGGCAGGAAGGCGAATGAAACTGACAAGGAATTGACTAAAGTGATCCATTTAAAAACACATACAGGTTCACCATCAACCACACAGACGGTTAAATGGCATCTAACATTTAACTCTGGAGATTGCGACGAAGGGTTCATTCGTATTAATAACAATGGCACTACTGACGGTAAAACTTCTACGCTATTTTTTGCAGAACTAGACTGCTATGAGGGAACCACTGACCGAGCGTGGCAAGCGTCGTCGAAAGATTTGGAAGAGGAAATAGACACCAAAGCCGATGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAACGAACTCTATTATTAAAGCTGAATTAGACGCTAAAGCGTCGCTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTGTTGGTAAAAAAGATAAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGTTCTCAGCTGGGAACGAGGTAATGTACATTTCAAAAGGTGTCATCAATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02790b8103fa3faa05c7838456e31f210b62392ddaf04335127ca1d784045c1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7375
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank