Protein

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Genbank accession
YP_004957011.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MVVILSRTDYTKNIDVKFDITKTVDELKQYELKEGEVRVILSYDTVSVYSSGYGYGAMFARNANKKDGDLIYDYYSGSQNDITNNRKVSIKIDKLGINTPDIVSISMTTNGSEKLTVKTDTLDPVENTYESADMTYIHTPVSKIAGDILYSNISQAIKSIHVLENNICSLKPASMKLQLVRLKELNQTINNMLQSMFDESPVALKNGDYIDVSFSGSASYGTGYCGYVNIKDTIRDITYKAYKVSSNAFDTTSGTKVIAVLTSDNSKTNVTYSDSVSTLESYEVAENEILLEISFSTASNILLNTGMELC
Physico‐chemical
properties
protein length:310 AA
molecular weight: 34298,20470 Da
isoelectric point:4,82258
aromaticity:0,08387
hydropathy:-0,23129

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004957011.1
1 310
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,8971
Central domain 11 283 274 0,6697
C-terminal 284 310 26 0,5892
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-283
C-terminal
284-310

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CPX
[NCBI] 		2885911 Uroviricota > Caudoviricetes > Connertonviridae > Fletchervirus CPX >
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004957011.1 [NCBI]
Genbank nucleotide accession
NC_016562 [NCBI]
CDS location
range 127570 -> 128502
strand -
CDS
ATGGTTGTTATACTTTCTAGAACTGATTATACAAAAAATATAGATGTTAAGTTTGATATAACTAAAACAGTTGATGAGCTTAAACAATATGAGCTTAAAGAAGGAGAAGTTAGAGTTATACTATCTTATGATACTGTATCTGTTTATTCTAGTGGGTATGGTTATGGAGCTATGTTTGCCAGAAACGCTAATAAAAAAGACGGAGATTTAATATATGATTATTATTCTGGAAGTCAAAATGATATAACAAATAATAGAAAAGTATCTATAAAAATAGATAAACTTGGTATTAATACTCCAGATATTGTAAGTATATCTATGACTACAAATGGTTCTGAAAAATTAACAGTAAAAACAGATACACTAGATCCTGTAGAAAATACATACGAATCTGCGGATATGACTTATATTCATACTCCTGTCAGCAAAATTGCAGGAGATATTCTGTATAGTAATATATCTCAAGCAATTAAATCAATACATGTGTTAGAAAATAATATATGTTCTTTAAAGCCTGCAAGTATGAAATTACAACTTGTAAGGCTCAAAGAACTTAATCAAACAATAAATAACATGTTGCAATCTATGTTTGATGAGAGTCCTGTAGCACTAAAAAATGGAGATTACATAGATGTTTCATTTAGTGGTAGTGCAAGCTATGGAACAGGATATTGTGGGTATGTTAATATAAAAGATACTATAAGAGATATTACATATAAAGCTTATAAAGTATCTTCAAATGCTTTTGATACAACTAGTGGAACTAAAGTTATTGCAGTTCTCACTTCTGATAACAGTAAAACAAATGTAACTTATTCCGATAGCGTATCAACATTAGAATCTTATGAAGTAGCAGAAAATGAAATATTATTAGAGATATCATTTTCAACTGCTAGCAATATTCTGCTAAATACGGGTATGGAGCTATGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dbf58ccc106d5ad03fdd44532b7da19c35b768f3c2cff6ef2dbee3be9f6911cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50