Protein

View in Explore
Genbank accession
QXO10171.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MIPLSLWNADHLVGLNSTDQIAVNWPVSGLNDVKSTFVTSNSTNTVVDVGGQNELNVSCNSSSGSNMYFWLPTINEMVSWGFSRVYSGFRFRCNAVNTSARFLYFNNGVYGLTAAANTVFVIEVITDCETKTRKAYVNGTQVTNVPTGLNDRIAIGSGGSIRILSSSNHSMNLMDMYTIVTDPATDPNPPDRIGTMIVRSAPVVSVTNDERFEVIGGGSVVDALNAPRTSGADLSHGVITDPNGSAMSVKFERPAVVPEGVIGATVMLSTALSPEDAGDPVTVTATAGDAVMEMMPVAAVPMQDYQSTPLGGVEVWDADAIANVSLSIRSNKLE
Physico‐chemical
properties
protein length:334 AA
molecular weight: 35370,36160 Da
isoelectric point:4,52640
aromaticity:0,06587
hydropathy:0,05419

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO10171.1
1 334
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,0158
Central domain 177 323 148 0,0570
C-terminal 324 334 10 0,9897
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-323
C-terminal
324-334

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_37
[NCBI] 		2859246 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO10171.1 [NCBI]
Genbank nucleotide accession
MW845760 [NCBI]
CDS location
range 176615 -> 177619
strand +
CDS
ATGATTCCATTGAGTCTCTGGAATGCCGACCACCTGGTTGGTTTGAACTCCACTGATCAAATTGCCGTTAACTGGCCTGTCAGTGGATTGAACGATGTTAAGAGTACGTTTGTGACGTCTAACTCCACGAACACGGTTGTGGATGTAGGTGGTCAGAACGAACTGAACGTTAGCTGTAATTCTTCATCCGGTTCAAACATGTACTTCTGGCTACCGACGATCAACGAAATGGTGTCGTGGGGATTCAGTCGTGTGTACAGTGGATTCCGGTTCCGCTGTAATGCCGTTAATACTTCTGCACGTTTCCTCTACTTCAATAACGGTGTGTATGGATTAACCGCAGCAGCCAACACGGTGTTTGTTATTGAGGTCATTACCGACTGTGAAACCAAAACCCGTAAAGCGTACGTTAATGGTACTCAGGTAACCAACGTACCTACTGGCTTGAACGACCGTATTGCAATTGGTTCTGGCGGGTCGATTCGTATCTTGTCATCGTCTAATCATTCCATGAACCTGATGGACATGTACACGATCGTAACAGATCCTGCAACAGATCCTAATCCACCGGATCGCATTGGGACCATGATAGTGCGATCAGCACCTGTGGTATCCGTAACCAATGATGAGCGCTTTGAAGTCATTGGCGGTGGCAGCGTAGTGGATGCTTTAAACGCACCACGTACCAGCGGGGCTGATTTGTCACACGGGGTAATCACCGATCCAAACGGTTCAGCGATGTCCGTGAAGTTTGAACGTCCTGCGGTTGTGCCAGAGGGTGTGATCGGTGCAACGGTGATGTTGTCTACGGCGCTGTCTCCTGAAGATGCAGGTGATCCGGTGACGGTAACTGCCACTGCTGGAGATGCCGTTATGGAAATGATGCCTGTAGCTGCGGTGCCTATGCAAGACTATCAATCCACGCCATTGGGTGGTGTTGAAGTTTGGGATGCTGATGCTATCGCTAATGTGTCTTTATCGATTCGCAGTAACAAACTCGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
caad0ad24d96144c4615d791653943612f4a28eb4f50d464769c13374dfe4022
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7085
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_37 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank