Protein

View in Explore
Genbank accession
QBX25641.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEATIEDNSFTVQFDTSMITTDESVVGYIYFEKVEQSADVYSFMFNVRVSEIDKAVKQPLIERETGRIVNVKDVVTKQELDELFAKIKEQGGTYDDSNIRSEISHISADIEALKTKPDNDTIYNDKPLVERVVALENKPIVDTSQFATKEELKTISLTPGPKGDKGEPGPRGADGLQGPQGLQGIQGERGQDGQPGPRGERGEQGPAGLPGPVGPQGPIGLTGPKGENGRDGVGIPQRISINGNIVSLSDGGGSIILPANNAGGQVNEYEIHGTGMPNGRVSAPVGTTYVDTAVTNGALKWIKRSGTDSQGWEVLTGDTGWRTLPIVSKLGASYLKIRRVNNMVTYQFGGLSWGWFGIVRRGGPGYILQPSDRERNCYILGLNGVPVGFRSEFSLIGGIYNDKGSPYGTWYLGGVGDSNMLRFQFTDPVPTDRDIGDIRVSSISYLTSEPWPDRLP
Physico‐chemical
properties
protein length:456 AA
molecular weight: 49286,48830 Da
isoelectric point:4,94683
aromaticity:0,07675
hydropathy:-0,46513

Domains

Domains [InterPro]
DC_0554
STR
1–456
DC_0554
IPR050149
Unmapped
159–232
IPR050149
IPR008160
STR
175–232
IPR008160
QBX25641.1
1 456
Architecture
STR
STR 1-456
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan266
[NCBI] 		2548082 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus infantis
[NCBI] 		68892 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25641.1 [NCBI]
Genbank nucleotide accession
MK448891.1 [NCBI]
CDS location
range 32960 -> 34330
strand +
CDS
GTGGAAGCAACAATCGAAGATAATTCATTTACGGTTCAATTTGATACATCGATGATCACCACGGATGAATCTGTTGTTGGTTATATCTACTTCGAGAAAGTAGAGCAGTCGGCAGATGTATATAGCTTTATGTTTAATGTCCGTGTCAGTGAGATTGACAAGGCAGTTAAACAACCATTGATTGAACGTGAAACAGGTCGAATTGTCAACGTTAAGGATGTTGTAACCAAGCAAGAACTGGATGAACTCTTTGCCAAAATCAAAGAGCAAGGCGGTACTTACGACGATAGCAATATCCGTAGTGAAATAAGCCATATTTCAGCCGATATTGAAGCGCTAAAGACCAAGCCTGACAATGACACCATCTATAATGACAAGCCCCTTGTAGAGCGTGTAGTGGCTTTAGAGAACAAGCCCATTGTAGATACAAGTCAGTTTGCAACCAAGGAAGAATTAAAAACAATCTCTTTGACTCCTGGACCAAAAGGAGATAAGGGAGAACCTGGACCAAGAGGGGCGGACGGTTTACAAGGCCCTCAAGGATTGCAAGGTATTCAAGGGGAACGTGGGCAAGACGGACAACCTGGACCTCGTGGAGAACGAGGGGAACAAGGCCCTGCTGGCTTACCTGGACCAGTCGGCCCTCAAGGACCTATTGGTTTAACTGGTCCCAAAGGCGAAAACGGTCGTGACGGTGTAGGCATCCCTCAAAGAATCAGCATCAATGGAAACATCGTGTCACTTTCTGACGGTGGTGGAAGTATTATCTTACCAGCTAATAATGCAGGTGGACAAGTCAACGAATACGAAATCCACGGCACTGGTATGCCTAATGGTAGAGTTAGCGCGCCTGTGGGGACAACCTATGTGGACACAGCGGTCACTAATGGCGCTTTGAAATGGATCAAACGCTCAGGAACTGACTCTCAGGGATGGGAGGTGCTAACTGGGGACACTGGTTGGCGTACTCTCCCTATCGTGTCAAAGCTAGGAGCTTCTTATTTAAAAATCAGACGTGTAAATAACATGGTTACTTACCAATTCGGTGGGTTAAGTTGGGGCTGGTTTGGTATTGTCAGACGTGGAGGCCCTGGATACATCCTGCAGCCTAGTGATAGAGAAAGAAACTGTTACATTTTAGGTCTAAACGGTGTACCTGTAGGCTTTAGGTCAGAGTTTAGCTTGATTGGTGGTATTTACAACGACAAGGGATCGCCTTATGGCACCTGGTACTTAGGAGGTGTTGGAGATAGTAACATGCTGAGATTTCAGTTTACTGATCCTGTCCCTACTGATAGGGACATCGGAGACATTCGTGTCAGCTCTATCTCATATCTTACGAGTGAGCCTTGGCCTGACCGCTTGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
820d44d36c48da78b4f860cc6e8800fd556b89f86d969e831bf2f1ee744c1742
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6988
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank