Protein

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Genbank accession
XRA40240.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARFRVWDERVRQWRDCVDVPMYVLYNDDWLALLPNSFSVANQFGDRWHEIDDSPDPDFDDPCATIDSEGCNGSPTSKTRGSGDGKGSRGPVYDQLKGYPPGYDLPDAGRSGFGQILNGAAPTGRAINRPGIHLQESYDPVGVTTRYGLGTYVNPNTPFSYVSGRGARITETIYAIPNAPGIVEIPFVCYDTYGMSIDIYHMGLRVASTCGKVTGRGRISFEYDRAAQDRRIMIRVRCEPGAAWALTVLPPSLITTVDRANLPLEYQTAYDFIQYPDLISERFLGTTVFPAPCHATVFPRKDRIVDNAALEYWHYIGAVQGRIILDYTSWDNFDYIEIYHNGRRIATTLDPQTELGYLTIEYNGTTDVTDIMVRIVASDFKGGASLESNYYSLYCPEARGARTYRHPCETYVIMSAGHHVTEDNFALGTQVDKRAVLVNCRAGSYESTFEVFDNKMNLLDREVVPAHSQGTLEFWKETWHVDRADITIRVTSAIGSDWSYFVWCPIQPAELEHRDLLLTYNCLTVEDQQQIWSIKQETNMYYNFRMDHEVQLNYQVATDRGESWHGGGRNPEIQAGAASVGGQFYKSKESMHGDMWCETIQYNPVKKKFGNFEIDRVEVSLWNQGDTGAWIEQTPNAANGWMCAVRVNEHRPGEHWVQGRITMTTYYKIV
Physico‐chemical
properties
protein length:670 AA
molecular weight: 75955,08510 Da
isoelectric point:5,21528
aromaticity:0,11940
hydropathy:-0,44164

Domains

Domains [InterPro]
DC_2160
ATT
1–250
DC_2160 DC_1307
XRA40240.1
1 670
Architecture
ATT
STR
ATT 1-250 | STR 251-669 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA40240.1
1 670
Domain Start End Length (AA) Confidence
N-terminal 1 41 41 0,4733
Central domain 42 386 346 0,9119
C-terminal 387 670 283 0,7732
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-41
Central
42-386
C-terminal
387-670

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sen-NF
[NCBI] 		3411927 No lineage information
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA40240.1 [NCBI]
Genbank nucleotide accession
PV359490.1 [NCBI]
CDS location
range 96613 -> 98625
strand +
CDS
ATGGCACGTTTCAGAGTATGGGACGAACGTGTTAGACAATGGCGTGATTGTGTGGACGTGCCTATGTACGTCCTTTACAATGATGACTGGCTCGCACTTCTTCCAAATAGCTTTAGTGTAGCAAACCAGTTCGGTGATCGCTGGCACGAAATCGATGACTCACCTGATCCAGACTTTGATGATCCATGTGCAACAATTGATTCAGAGGGATGCAACGGGAGTCCGACTTCTAAGACTCGCGGATCAGGGGATGGGAAAGGAAGCCGCGGCCCTGTATACGATCAGCTTAAAGGATATCCACCGGGATACGATCTTCCCGATGCGGGACGTTCTGGATTCGGACAGATTCTTAACGGTGCTGCACCGACAGGACGCGCTATCAATCGTCCCGGTATCCATCTACAAGAGTCCTATGATCCTGTGGGTGTAACGACACGCTATGGATTAGGGACGTACGTTAACCCAAACACTCCATTCAGTTATGTGAGTGGGCGCGGTGCGCGTATTACTGAGACGATCTACGCTATCCCTAACGCGCCCGGAATCGTTGAAATTCCTTTCGTCTGCTATGATACGTACGGCATGTCTATCGATATCTATCATATGGGTCTGCGTGTCGCATCAACGTGCGGTAAAGTAACAGGACGTGGGCGCATCTCATTTGAGTATGATCGTGCAGCACAAGACAGACGTATTATGATCCGTGTGCGCTGTGAGCCTGGTGCAGCATGGGCACTCACTGTCCTGCCTCCATCTCTTATCACTACTGTAGACCGTGCGAATCTCCCACTTGAGTATCAGACAGCGTATGACTTCATTCAGTATCCTGATCTTATCTCTGAGCGCTTCTTAGGAACAACTGTATTTCCTGCACCGTGTCACGCAACTGTGTTTCCTCGCAAAGACAGGATCGTTGATAACGCAGCGTTAGAATACTGGCATTATATCGGTGCTGTGCAAGGTCGCATCATTCTGGATTACACATCGTGGGATAACTTTGATTACATCGAGATCTATCACAACGGAAGACGCATAGCGACCACACTTGATCCTCAGACAGAGTTAGGCTATCTGACTATCGAATACAACGGGACTACTGACGTTACGGACATCATGGTTCGCATCGTTGCATCGGATTTCAAAGGCGGAGCGAGTTTAGAATCCAACTATTACTCCCTATACTGTCCGGAAGCGCGTGGAGCCAGAACGTACAGGCACCCGTGTGAAACCTACGTTATTATGAGCGCAGGGCATCACGTAACAGAGGATAACTTTGCGTTAGGGACTCAAGTTGATAAACGCGCAGTGCTTGTTAACTGCCGTGCTGGATCGTATGAATCGACGTTTGAAGTGTTCGACAATAAAATGAATTTGTTGGACAGAGAAGTTGTTCCCGCACACTCTCAGGGTACGTTGGAATTCTGGAAAGAAACTTGGCATGTTGACCGCGCTGATATCACAATCCGCGTAACATCTGCTATAGGATCTGACTGGTCTTATTTCGTATGGTGCCCGATTCAACCTGCCGAACTGGAACACAGGGATCTCTTGCTGACGTATAACTGTCTGACAGTAGAAGATCAACAACAGATTTGGAGCATCAAACAAGAAACCAACATGTATTACAACTTCCGTATGGACCACGAAGTACAGCTTAACTATCAAGTTGCTACTGATCGCGGAGAGAGTTGGCATGGTGGTGGACGTAACCCTGAGATCCAAGCAGGTGCTGCATCCGTCGGAGGACAGTTCTATAAGTCCAAAGAATCGATGCACGGAGATATGTGGTGCGAAACGATCCAATACAATCCTGTGAAAAAGAAATTCGGTAATTTTGAAATAGATCGAGTCGAAGTGTCTCTGTGGAACCAAGGTGATACCGGTGCGTGGATTGAGCAAACTCCTAACGCTGCTAACGGTTGGATGTGTGCTGTTCGAGTTAACGAACATAGACCGGGAGAACACTGGGTTCAGGGACGTATTACGATGACAACCTATTACAAAATCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa32cb46d9e9c375507ba43130514abc1acdb170d79d7ea1398f0edf48a3c1e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50