Protein

View in Explore
Genbank accession
QYS24755.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAVLSGFPQNVTYQSVTVAQGGGSENLLINPRGKINQANESAGVLAAGQYFCDGWKAGGSGAEVYIDADGFRLVSGSILQLVPNNLESGRSIRGNMDALMGNPVISINGGSDNELSDSAQYIQFEISGNNSKFTRIVLAESVSAPIYQQLSDELKHCKRFLFVSESNQELYSALSAYSFVSYQFDEMHIPPAVTVGQLYQGSQIFQVSKNKVMFLKSGSSSTAGFTGGIKLDARP
Physico‐chemical
properties
protein length:235 AA
molecular weight: 25160,88790 Da
isoelectric point:5,19556
aromaticity:0,09362
hydropathy:-0,11915

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYS24755.1
1 235
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,5020
Central domain 151 224 75 0,0009
C-terminal 225 235 10 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-224
C-terminal
225-235

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage NO16-like NB10
[NCBI] 		2863258 No lineage information
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYS24755.1 [NCBI]
Genbank nucleotide accession
MZ230996.1 [NCBI]
CDS location
range 5522 -> 6229
strand -
CDS
ATGGCAGTATTAAGCGGTTTTCCTCAAAACGTAACATATCAATCGGTGACAGTGGCGCAAGGCGGCGGCAGTGAGAATTTACTCATTAACCCACGTGGCAAAATCAATCAAGCAAATGAAAGCGCGGGCGTACTCGCGGCAGGGCAATATTTTTGCGACGGTTGGAAAGCGGGCGGGTCGGGCGCTGAGGTCTATATTGACGCTGATGGTTTTAGACTAGTAAGCGGTTCAATTCTTCAGTTAGTGCCGAATAACCTAGAAAGTGGTCGAAGCATTCGCGGGAATATGGATGCGCTAATGGGCAATCCGGTAATCAGCATTAACGGCGGCTCAGATAATGAATTGTCAGACAGTGCACAATACATTCAATTTGAAATTTCCGGCAATAACTCGAAATTCACGCGCATCGTTTTAGCGGAATCCGTGAGCGCTCCGATTTATCAGCAGTTATCTGATGAGCTAAAGCATTGCAAGCGATTTTTATTTGTTAGCGAAAGCAATCAAGAGCTTTATTCAGCTTTGTCTGCTTACTCATTTGTTAGTTATCAATTTGATGAAATGCACATACCGCCAGCGGTGACAGTGGGGCAGCTCTATCAAGGGTCGCAGATATTTCAAGTTTCAAAAAATAAAGTTATGTTTTTGAAGTCCGGCAGCAGCTCGACAGCGGGATTTACTGGCGGAATAAAACTGGACGCGAGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3903180e582ca9c69b115220a803b6a18e00645734d11410ffef613db429600c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8734
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Staying below the radar: unraveling ubiquitous cryptic non-tailed vibriophages and implications for their bacterial hosts Kalatzis,P.G., Mauritzen,J., Petersen,C.S., Millard,A., Tsertou,M., Katharios,P. and Middelboe,M. 2023-02-15 — GenBank