Protein

View in Explore
Genbank accession
YP_002727863.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MFKTEVKGRYTLIRRKADGTPVETLEFDNIITNAGLDWIAAMDTDLMGEPVAVSTSTADPNPSAPAIPEVVQRTSASAPGGGTTSGLDGEWLFWRKRWRFPQGTLAGQVLATVGLICNSDRRFENNTGELIPKDTPLSYTRIKDAAGQPTTLVVAADEILDVQYEFRSRPVGTAEAKFVISGVERTFRLIPQPFANRANLSGERYIFYNTNPYINGKDASGGNVRDGQWQKKYPKYVRGSYKAQITLLAQVQNGNMAGGITGTEELQIYNGRNYVLDINPPVVKNNTQEFTVTLEFTVARA
Physico‐chemical
properties
protein length:301 AA
molecular weight: 33149,92580 Da
isoelectric point:7,71489
aromaticity:0,09302
hydropathy:-0,39103

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phikF77
[NCBI] 		627480 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002727863.1 [NCBI]
Genbank nucleotide accession
NC_012418.1 [NCBI]
CDS location
range 37312 -> 38217
strand +
CDS
ATGTTTAAGACCGAAGTAAAGGGACGTTACACCCTGATTCGCCGCAAGGCGGACGGCACTCCGGTGGAGACTCTGGAGTTCGACAACATCATTACGAATGCGGGCCTGGATTGGATCGCCGCTATGGATACCGACCTCATGGGCGAACCCGTAGCGGTCAGCACTTCTACAGCCGATCCCAACCCGAGCGCACCCGCCATCCCGGAGGTTGTGCAACGCACGTCCGCATCTGCCCCTGGTGGAGGTACTACGTCGGGCCTGGATGGCGAGTGGCTGTTCTGGCGGAAGCGTTGGAGATTCCCGCAGGGCACCCTAGCTGGTCAAGTCCTGGCCACCGTGGGCCTCATCTGCAACTCGGATCGTCGCTTCGAGAATAACACGGGTGAGCTGATCCCGAAGGATACCCCGCTGTCGTACACTCGCATCAAGGACGCCGCCGGGCAGCCTACTACTCTGGTGGTGGCCGCTGACGAGATTCTGGATGTCCAGTACGAGTTCCGCAGCCGGCCCGTAGGAACGGCTGAGGCCAAGTTCGTGATCTCCGGCGTGGAACGCACCTTCCGGCTGATCCCACAGCCTTTTGCGAACCGTGCTAATCTCTCCGGGGAACGCTACATCTTCTACAACACCAACCCCTACATCAACGGCAAGGACGCCTCCGGCGGCAATGTCCGAGACGGTCAGTGGCAGAAGAAATATCCCAAGTACGTGCGCGGCTCCTACAAGGCGCAGATCACGCTGCTGGCCCAGGTCCAGAACGGCAATATGGCTGGCGGCATCACCGGCACCGAGGAACTCCAGATTTACAATGGACGTAACTATGTGCTCGATATCAACCCGCCTGTTGTGAAGAACAATACCCAGGAGTTCACCGTGACCCTGGAGTTTACGGTGGCGAGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b4e3552189abb381f6ec67e61d8324fa091892808d3a9a82934c9d3a62281131
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7414
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomes of phiKMV-like viruses of Pseudomonas aeruginosa contain localised single-strand interruptions Kulakov,L.A., Ksenzenko,V.N., Shlyapnikov,M.G., Kochetkov,V.V., Del Casale,A., Allen,C.C.R., Larkin,M.J., Ceyssens,P.J. and Lavigne,R. 2009-08 — GenBank