Protein

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UniProt accession
A0A8S5MQ02 [UniProt]
Protein name
Translocon-associated protein beta (TRAPB)
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIKKEVVTGDDLGEALGIDPVAKKVNVLADGTTIRVNSDNKLEAVNSGGAGLDCDAIDQLPEAAWKKGTVVLAKQDGQCVRLTALESIFQEVGVGITANKVTAFTDDSFDVVVTVTNTGEGKNDLTNLVINKPNGGGYTLQDIREAKQDVDSFDKTGELSYDIKGLARGGTFTVRFKVVPSEAGTFQFTAAVNPNTSLDLDGKNNTATLILSAQTKRDNTYVPSVDCPLITATELDHNTVLVQAVPLVTSSSTYVTLPETKAMNVFAERRTLKGLRIKLDGASTVIGYATNGTSGFYSLILSNGTTSHGAMVYGDDNNVYIKTDANAEKTGSAGFTFANGVLEITADTAIFAFCCRPTGTNCKWQTYKVLATVPTVSRSINVTNATGCTTKKAITYKAEDKPSSDSFERVQVIPASVTVDRSRVIQPVISKSSPASADDKLIITVRAGTAATVEFTSTDNYADAASSQGKTAISAGRVTVAADAKATDSVNTKYIQVIVED
Physico‐chemical
properties
protein length:502 AA
molecular weight: 52961,78940 Da
isoelectric point:5,14111
aromaticity:0,05976
hydropathy:-0,11912

Domains

Domains [InterPro]
DC_1137
STR
1–502
DC_1137
IPR013783
STR
92–216
IPR013783
A0A8S5MQ02
1 502
Architecture
STR
STR 1-502
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5MQ02
1 502
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,6501
Central domain 208 406 200 0,3842
C-terminal 407 502 95 0,8711
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-207
Central
208-406
C-terminal
407-502

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctUS21
[NCBI] 		2826557 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD84409.1 [NCBI]
Genbank nucleotide accession
BK014959 [NCBI]
CDS location
range 36981 -> 38489
strand +
CDS
ATGGCGATTAAAAAAGAAGTCGTTACAGGTGACGACTTAGGTGAAGCCTTGGGTATCGACCCAGTGGCGAAGAAAGTAAATGTCTTAGCTGACGGAACGACAATCCGCGTGAATAGCGATAATAAGCTCGAAGCGGTTAATAGTGGCGGTGCAGGTTTAGACTGCGACGCTATCGACCAATTACCGGAAGCTGCGTGGAAGAAAGGGACGGTAGTTCTCGCAAAACAAGACGGCCAATGCGTTCGCTTAACTGCGCTTGAGTCCATTTTCCAAGAGGTAGGGGTCGGCATCACTGCGAACAAAGTAACGGCGTTTACGGATGATAGCTTCGATGTTGTTGTCACCGTAACCAACACCGGCGAAGGAAAAAACGACTTAACTAACTTAGTTATCAACAAGCCTAACGGTGGCGGATATACCCTCCAAGACATCCGCGAAGCTAAACAAGACGTTGATTCTTTCGACAAGACCGGGGAACTGTCTTATGACATTAAAGGTCTTGCGAGGGGTGGTACGTTCACAGTTCGCTTTAAAGTCGTACCAAGCGAAGCAGGTACTTTCCAGTTCACCGCTGCGGTGAACCCAAATACCAGTTTAGACTTAGACGGTAAGAATAACACTGCGACGTTGATTCTTTCTGCGCAAACTAAGAGAGACAACACCTACGTTCCGAGTGTAGATTGTCCGTTAATTACAGCAACGGAGTTAGATCACAATACGGTGTTGGTGCAAGCTGTTCCTTTAGTCACAAGTAGTTCGACGTATGTTACCCTCCCAGAGACCAAAGCGATGAATGTGTTTGCTGAGAGACGCACACTTAAAGGTCTTCGAATTAAGTTGGATGGCGCTTCGACCGTTATTGGCTATGCGACGAACGGTACGAGTGGCTTCTACAGTCTAATCCTAAGCAATGGGACAACATCGCATGGGGCGATGGTATATGGGGATGATAACAACGTATATATCAAAACAGATGCTAATGCAGAGAAAACAGGGAGCGCCGGTTTCACTTTCGCAAACGGTGTACTTGAGATCACCGCCGACACTGCGATTTTTGCTTTTTGTTGCCGCCCTACCGGTACGAATTGTAAATGGCAGACTTATAAAGTACTTGCAACCGTACCGACAGTCTCTCGCTCCATCAACGTAACTAATGCGACGGGGTGTACGACGAAAAAGGCAATTACCTACAAAGCTGAGGATAAGCCTAGCTCCGATTCCTTTGAGAGAGTGCAGGTTATCCCAGCGTCTGTTACTGTTGACAGAAGTCGTGTTATTCAACCCGTTATAAGTAAATCTAGCCCTGCCTCCGCAGACGATAAACTTATCATCACCGTTCGAGCCGGTACTGCTGCGACGGTGGAGTTCACTAGTACGGATAATTACGCTGACGCAGCGTCTTCGCAAGGTAAGACGGCTATTTCGGCAGGGCGTGTAACAGTCGCCGCAGACGCTAAAGCTACGGACTCTGTGAACACGAAATACATTCAAGTTATCGTAGAAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d567b69341c632f50164a31e6b229bf1338325f65afc0a4c6cfd244a85cfe29
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8768
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50