Protein

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Genbank accession
QAY00004.1 [GenBank]
Protein name
long tail fiber, distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKVAGVRPTPAQLAEGELAINLKDRLLFTKDDTGAIIDLGFAKGGNIDGNVIHNGNYNQTGDYALKGAFTQTGSYTTSGSITANGDITAKSRLMTDNGEVLVRGAGTTHVRFQDLADARERGIIYSQNRAGDTKQILNVRVQDYTNSTSNIFAFNGDGLFYAPSISGGTSVKSPIIYTNKVITDGKAAGDYDISSLSNNTPLAESETAINHLRVMRNAVGAGIFHEVNVNDGIAWYSGDGLDTYLWSFTWSGGLKAGHSISVGLPGGPKGYSELGTASIALGDNNTGLKWKQDGQFHTVNNGAYTLLTTPTEVTSLKQLVAGYSTNGSDLILPTAQNYPLVIVNTTNDKNGFGDGQTLLGYHQSGKYHHYFRGKGVTNVNTDGGLLVTPGNVEVRGGSVNIDGRGNASTVIFKGSTTGYSSVDNIELKGWGDTFNTVGGSRKNVLETSDATGWMHYIQRTTAGKVESYLNGTMNIVEGLSVSQDTSLKRNLYVSNEIKVRAASGLRIWNDKYGVIFRNSEDQLHIIPTNANAGESGGLGPLRPLSIMLDTGRVKIPNLEAKQVSGVLEFITTHGSSYANQNTTKAPLYQTLDSASAQAFYPITKQKNTVSNVTVTQGMDRTTSEYRIVAQGDLLDDGDDTGLKYWRFTKEGNFMAQNRLYAGTAFMDTEGNIVGSIWNKYSGATNLDAAVNTRVGKGGDTMTGRLTLKTNSDAIVIDYPADEAGYVKGKKGGVDNWYIGNGGADNGLAFWSFQSQGGININPNGEVILSPQGASVFNVNRDRIYMNGSNWIAHKSGAWGDQWGLEAPYFLEFGSVGEDSYYPIIKGKSVITGQGYTTSVELGIRRTPQAWGQAIIRVGNAERGDGPVGIFEFHSSGLFYSPTMVQTPAIGVGTVNGLGAPSIAIGDNDTGLSHGGDGRINMVANGIHIASWSSSYHIHQGLWDTTGALWTEQGRAIMSYGHLVQANDSYSTYVRDVYVRSDIRVKKDLVKFENASDKLSKINGYTYMQKRGMDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKKLVKSLLK
Physico‐chemical
properties
protein length:1101 AA
molecular weight: 118487,45720 Da
isoelectric point:5,97630
aromaticity:0,08629
hydropathy:-0,35640

Domains

Domains [InterPro]
DC_0538
STR
1–690
DC_0538 G3DSA:6.20.80.10 IPR030392
IPR048390
ATT
450–557
IPR048390 DC_0339 Coil
IPR030392
CHP
991–1050
IPR030392
DC_0131
RBD
1033–1101
DC_0131
QAY00004.1
1 1101
Architecture
STR
ATT
STR
RBD
STR 1-449 | ATT 450-557 | STR 558-1050 | RBD 1051-1101
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAY00004.1
1 1101
Domain Start End Length (AA) Confidence
N-terminal 1 608 608 0,0721
Central domain 609 807 200 0,3957
C-terminal 808 1101 293 0,8558
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-608
Central
609-807
C-terminal
808-1101

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcWhh-1
[NCBI] 		2419743 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAY00004.1 [NCBI]
Genbank nucleotide accession
MH791409 [NCBI]
CDS location
range 47725 -> 51030
strand +
CDS
ATGGCTACTTTAAAACAGATACAATTTAAAAGAAGTAAAGTAGCTGGTGTACGTCCTACGCCAGCGCAGTTGGCTGAAGGCGAGCTGGCTATTAACTTAAAAGACCGTTTGTTATTTACCAAAGATGACACTGGAGCGATTATCGACCTTGGCTTTGCTAAAGGTGGTAATATCGACGGAAACGTTATTCATAACGGTAACTACAACCAGACCGGCGATTATGCCCTGAAGGGTGCTTTTACCCAAACAGGTAGTTATACGACATCCGGAAGTATAACAGCAAATGGCGATATCACAGCAAAATCTCGCCTAATGACAGATAACGGTGAAGTTCTTGTACGGGGTGCAGGAACTACCCACGTTCGATTCCAGGATTTGGCTGATGCGCGTGAAAGAGGCATAATTTATTCTCAAAACCGTGCTGGGGATACCAAGCAAATCTTAAATGTTCGTGTTCAGGATTACACTAATTCAACATCTAATATTTTTGCATTCAACGGTGACGGTTTATTTTATGCTCCATCTATTTCTGGTGGAACATCGGTAAAATCTCCAATAATTTATACTAATAAAGTTATTACCGACGGTAAAGCCGCCGGCGATTACGATATATCTTCATTATCAAATAACACTCCATTGGCAGAAAGCGAAACGGCTATTAACCACCTCCGTGTTATGCGAAATGCTGTAGGAGCAGGTATTTTCCACGAAGTTAATGTTAATGACGGAATAGCCTGGTATTCCGGAGATGGCTTAGACACTTATCTTTGGTCGTTTACCTGGTCCGGTGGATTGAAAGCCGGTCATTCTATTTCTGTAGGTCTTCCAGGTGGCCCTAAAGGATATTCTGAATTAGGGACGGCTTCAATTGCTCTTGGTGACAATAACACAGGTTTGAAATGGAAACAAGACGGCCAGTTCCATACAGTTAATAATGGAGCTTATACTTTACTTACAACTCCGACTGAAGTTACAAGCCTTAAACAGTTAGTTGCTGGTTATTCAACCAACGGTTCTGATTTAATTCTTCCTACAGCTCAAAACTATCCATTAGTTATTGTTAATACTACTAATGATAAAAACGGCTTTGGTGATGGACAGACTCTTTTAGGTTATCATCAGAGTGGTAAATACCACCATTATTTCCGTGGTAAAGGTGTAACAAACGTTAACACTGATGGTGGGTTGTTGGTTACTCCTGGTAACGTTGAAGTCCGTGGTGGTTCGGTTAATATTGACGGTCGTGGTAACGCTTCCACTGTGATTTTTAAAGGAAGTACCACAGGATATAGTTCAGTTGATAATATAGAGCTCAAAGGTTGGGGTGACACTTTTAATACGGTAGGTGGTTCTCGTAAAAACGTATTGGAAACATCTGATGCTACCGGCTGGATGCACTATATTCAACGAACTACAGCAGGTAAAGTCGAATCTTATTTAAACGGCACGATGAACATCGTCGAAGGATTGTCTGTCAGTCAAGATACATCCTTAAAACGCAATCTGTATGTTTCCAATGAAATTAAAGTCCGCGCTGCTAGTGGTCTTCGTATTTGGAATGATAAGTATGGTGTTATTTTTCGAAATTCAGAAGACCAGCTGCATATTATCCCAACCAATGCTAATGCTGGTGAAAGTGGCGGATTGGGTCCATTACGCCCATTAAGTATTATGTTAGACACTGGTCGGGTTAAAATCCCTAACTTAGAAGCTAAGCAGGTTTCAGGTGTATTGGAATTCATCACCACTCACGGCTCCTCTTATGCCAACCAGAATACGACTAAAGCCCCGTTGTATCAAACATTAGATTCTGCGTCTGCTCAAGCATTCTATCCTATTACTAAGCAGAAAAATACTGTTTCGAATGTAACTGTTACTCAAGGTATGGACCGAACTACAAGTGAATACCGAATTGTTGCTCAAGGTGATTTGCTTGATGATGGTGATGATACAGGATTAAAATATTGGCGCTTTACCAAAGAAGGTAACTTCATGGCTCAGAACCGCTTATATGCCGGTACAGCTTTCATGGATACCGAGGGTAATATTGTTGGTTCTATTTGGAACAAGTATAGCGGTGCTACTAACCTTGACGCAGCGGTGAATACTCGTGTTGGTAAAGGCGGGGACACAATGACAGGCCGCTTAACTCTTAAAACCAATTCAGACGCTATTGTTATTGATTATCCGGCAGATGAAGCGGGTTATGTTAAGGGTAAAAAAGGTGGTGTTGATAACTGGTATATAGGTAATGGTGGTGCTGATAACGGTTTAGCCTTCTGGAGCTTCCAATCCCAAGGTGGTATCAATATTAACCCGAATGGCGAGGTTATTTTATCTCCACAAGGTGCTTCAGTATTCAATGTAAACCGAGACCGTATTTATATGAACGGTTCCAACTGGATTGCACATAAATCTGGTGCATGGGGTGACCAATGGGGTTTAGAAGCACCTTATTTCCTTGAGTTTGGTAGTGTGGGTGAAGACAGTTATTATCCTATTATTAAAGGTAAATCAGTAATTACTGGTCAAGGATATACTACTTCTGTTGAGCTTGGTATTAGACGTACACCTCAAGCATGGGGACAAGCGATAATTCGTGTAGGTAATGCCGAGCGCGGCGACGGTCCTGTAGGTATTTTCGAATTCCATTCTAGCGGACTATTCTACAGCCCTACTATGGTTCAAACTCCTGCAATCGGTGTTGGTACTGTTAACGGATTAGGTGCTCCTAGTATTGCAATTGGTGATAATGATACAGGCTTATCACACGGTGGTGACGGCCGAATCAATATGGTTGCCAATGGGATTCATATTGCGTCATGGTCCAGCTCATACCATATCCATCAAGGTCTTTGGGATACCACTGGCGCTTTATGGACTGAGCAAGGAAGAGCTATTATGTCTTATGGTCATCTTGTTCAGGCAAACGACAGCTATTCTACATATGTCCGTGACGTTTATGTCCGTTCTGATATTCGTGTTAAAAAGGACCTCGTTAAATTTGAAAATGCTTCTGATAAGCTTTCTAAAATTAACGGTTACACTTATATGCAGAAACGTGGAATGGACGAAGAAGGTAATCAGAAATGGGAACCTAACGCTGGTTTAATTGCTCAAGAAGTTCAAGCTATTTTACCAGAATTAGTTGAAGGTGACCCTGACGGTGAAGCTTTACTTCGTTTGAACTACAACGGTGTAATTGGTTTAAATACAGCTGCAATCAACGAGCATACTGCAGAAATTGCAGAACTCAAATCAGAGATTGAAGAGCTTAAAAAATTGGTTAAATCATTGTTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cfcc148576ecb41336b69bb859c6436ff62d3c02ed75f30a1f7a55de5f9e0c14
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5308
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
EcWhh_1, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank