Protein

View in Explore
Genbank accession
UYD59702.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVANNIKNHISDSAESVNYTGDNWPAIVTTVADALDRVAPWAIIDNGLPLATTQIAGIIRIATTAEMHAGTSANTAITPALLKLAMATPQASETIVGNTRYATNAEALALTLNTAAITPAKLGYVFANKAATESARGTMRISTQAQATSGTDDATTMTPLKTKLAIQALSQAWGTATESARGVVQMATVAQALQGTLREGFAISPYTLSKMAGTESAAGMFKIASNSQILALADNTVAVTPAKLGILKATASQLGLVKLSGVSTAAANTALAASAPVLYTSGGIITGDVTFTGNMQGIQWSRNTDMAHIVFKNDSNADSNSFMQFCVGDDNNEYFRWVNRFSGSDNIMATLRPGGHMWLAGNIDVNDFYIRSDRRLKHGFKPIENALDKIDLLNPGTYHKQYSLTDDRIVGVEAGIFAQDFQKAMPEGVRSLEDGTLTVSPMGAIAFLIQCNKELKARLEKLEGIK
Physico‐chemical
properties
protein length:466 AA
molecular weight: 49359,50040 Da
isoelectric point:6,33024
aromaticity:0,06223
hydropathy:-0,00966

Domains

Domains [InterPro]
DC_0176
STR
1–418
DC_0176
IPR030392
CHP
372–429
IPR030392
IPR030392
CHP
372–466
IPR030392
DC_2193
RBD
402–465
DC_2193
UYD59702.1
1 466
Architecture
STR
RBD
STR 1-418 | RBD 419-466
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM5
[NCBI] 		3101603 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD59702.1 [NCBI]
Genbank nucleotide accession
OP380602.1 [NCBI]
CDS location
range 110535 -> 111935
strand +
CDS
ATGGTCGCAAATAACATCAAAAACCACATCTCCGATTCAGCTGAATCGGTTAACTATACCGGTGATAACTGGCCGGCGATTGTGACTACAGTCGCCGATGCTCTAGATCGAGTAGCTCCATGGGCTATTATCGATAACGGGCTGCCTTTGGCTACTACCCAGATTGCTGGTATTATCCGAATCGCTACTACTGCTGAAATGCATGCAGGAACAAGCGCCAACACGGCGATAACGCCTGCGCTGCTTAAGCTGGCGATGGCTACCCCACAAGCTTCCGAGACCATTGTTGGGAATACCCGATACGCGACAAACGCTGAAGCTTTGGCTCTCACGTTAAATACAGCAGCGATCACACCTGCAAAGCTCGGGTATGTTTTTGCAAATAAGGCTGCAACCGAATCAGCTCGTGGCACAATGCGCATTTCGACACAGGCGCAGGCAACCTCCGGGACTGATGATGCGACAACCATGACGCCGCTTAAAACTAAGTTGGCTATCCAGGCGCTAAGTCAGGCATGGGGAACTGCGACCGAATCAGCTCGCGGTGTTGTTCAGATGGCTACCGTAGCACAAGCATTGCAAGGAACATTGCGTGAAGGTTTTGCGATAAGTCCATACACTCTGTCAAAAATGGCTGGAACTGAATCTGCTGCTGGGATGTTTAAAATTGCATCTAATTCGCAAATTCTTGCCCTCGCTGATAACACCGTTGCTGTAACACCAGCTAAATTGGGTATTTTGAAAGCAACTGCATCACAGTTGGGTCTTGTCAAACTATCAGGCGTATCAACTGCTGCTGCTAATACCGCCTTGGCTGCATCCGCACCAGTACTTTACACGTCAGGAGGTATAATCACCGGTGATGTTACTTTCACTGGCAACATGCAAGGAATTCAATGGTCGCGAAATACGGATATGGCGCACATCGTTTTCAAAAATGATTCCAACGCCGATTCTAACTCGTTCATGCAATTCTGTGTTGGTGACGACAACAACGAATATTTCAGATGGGTAAACCGTTTCAGCGGATCTGACAATATTATGGCGACACTTCGTCCAGGTGGTCATATGTGGCTGGCTGGTAATATCGATGTCAACGATTTCTATATTCGTTCTGACCGCCGCCTTAAGCATGGTTTCAAACCTATTGAAAACGCACTTGATAAGATCGACCTCTTGAACCCAGGCACTTATCACAAACAATATTCATTGACCGATGACCGAATTGTTGGCGTGGAAGCTGGTATTTTCGCACAAGATTTCCAGAAGGCTATGCCTGAAGGTGTAAGATCATTGGAAGATGGGACGTTGACAGTTTCTCCTATGGGCGCGATAGCATTTTTAATACAATGCAACAAAGAACTTAAAGCACGTCTCGAAAAATTAGAGGGTATAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2df53ef6a85ea0f966e647f3fe8c11cba5341dc297388e0f9ba16926d5525a85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7733
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank