Protein

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Genbank accession
YP_010670600.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MPVRIDGTGSVSGLTNYTAENFTTTDLTVTEDITNPSFNALEVSPRNLIINGSMQVAQRGTSATGVTGPGYTTVDRFSSFIINLGTWDVEQSTDAPAGFAFSKKLTCTTADVTPAASDRLNISYVFEGNDLVPALTTGGGMRSLSFSFWVKSNKTGEACINVYQTYNSLSTVVLRYNITAADTWQKVDLTIPADPSAVIPIDNNGSIVIEYWLNSGSDFQGGVEQGSWSPMVNANRNAVNLGVGGATSDYFAITGVQLTATDTPVTFQHEDYATTLAKCQRYYDKKSLQRQVMVYTSNNNFYQATVHWHQVMRAQPSVSFSTNLIDTQPGGTDINPIANNIDDQMCRIYTPTTISNGWNSIILNSGIFYILADAEL
Physico‐chemical
properties
protein length:376 AA
molecular weight: 40814,87200 Da
isoelectric point:4,54572
aromaticity:0,09840
hydropathy:-0,16223

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010670600.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,9557
Central domain 21 219 200 0,0409
C-terminal 220 376 156 0,9094
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670600.1 [NCBI]
Genbank nucleotide accession
NC_070965.1 [NCBI]
CDS location
range 67397 -> 68527
strand -
CDS
ATGCCTGTACGTATTGACGGAACTGGGTCAGTCAGCGGACTCACTAACTACACAGCTGAAAACTTCACTACAACTGACCTGACGGTTACGGAGGATATTACCAACCCTTCGTTTAATGCTTTGGAGGTATCTCCAAGGAACCTCATCATCAATGGGTCCATGCAAGTGGCGCAGAGGGGAACTTCTGCGACCGGGGTAACTGGCCCTGGATACACGACGGTTGATAGATTCAGTAGTTTTATCATTAACCTTGGTACATGGGATGTTGAGCAATCTACTGACGCCCCCGCTGGATTTGCTTTTTCTAAAAAGCTGACATGCACCACTGCCGATGTAACGCCAGCTGCCTCAGACCGATTAAACATCTCCTATGTATTTGAGGGCAATGACCTGGTACCAGCCCTTACGACTGGTGGTGGGATGAGATCCCTCAGTTTTTCCTTTTGGGTCAAATCAAACAAGACAGGCGAGGCATGTATAAATGTTTATCAAACTTACAATTCACTCAGTACAGTTGTATTGAGATATAATATTACTGCTGCAGACACTTGGCAGAAAGTAGACCTCACTATCCCCGCCGACCCCTCTGCTGTAATACCTATAGACAATAACGGCAGTATTGTTATCGAATACTGGCTCAACTCCGGTAGTGATTTCCAAGGAGGTGTTGAACAGGGGTCATGGAGCCCCATGGTCAATGCTAATAGAAACGCCGTCAACCTCGGTGTGGGTGGTGCAACAAGCGATTACTTTGCAATCACTGGTGTCCAACTAACCGCCACCGATACTCCCGTTACTTTCCAACACGAAGACTACGCCACCACTCTCGCTAAGTGTCAGCGATATTACGATAAAAAGAGCTTGCAGAGGCAAGTAATGGTTTACACCAGTAATAACAACTTCTATCAGGCAACCGTACACTGGCACCAAGTAATGAGGGCTCAACCTTCTGTGTCCTTCAGTACAAATCTGATTGACACTCAGCCAGGGGGTACTGATATCAACCCCATCGCAAACAACATAGACGATCAAATGTGCAGAATTTATACACCTACGACTATCTCCAACGGATGGAATTCTATCATCCTGAATAGTGGAATCTTTTACATACTTGCCGACGCTGAACTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3123db64bba847e087ba66a5721d6e3d8b4f69ea581c6acafa26de675bd06d76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank