Protein

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Genbank accession
XMN69752.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MATPLITSAFARIGDTRNPPQTDPNGSVNWDNGYTPNYEIDLSSGDPLAKAVERDVMNYLFNILTDNARQYQKNGNPEWYSNMPNGYPIGAIVLVAITGGFDLYRSLANNNTSNPVGSSAWDKIWTSAQLRGIIPMPLGGQQYISGGLVPAGTDIKSLTDGTYIVATDSIAAQVANLPIAKAGMLEVKKFSAGGQPASVYRYNATSNDSYWLIDGPGSTGIWNRGVNSNEIGYTAGFIPRIQTGGFSAQDVGTNYFRIGVQQAADLKYSEIFADSNAAEGAIVSGLLFNYGGNSAKFGAIRGSNNTLSTVALMVDNSKKFDIAPADLGAINWYTSTFGINGSSPQVQLRSPNGQGIVSIGSDQNAGTMSIWTQSGTSAQFRSNGLYYQGQTTGENGAMVSGQVDAGAWNDWKTKSAGVGISIATQNAAHNIWKATNWGNNHTAAMQVSHPSNQSDYAVARLVVFAGTGKADAGFQFAGNGSFTAASGAFTNIQISTLLAIGDNDSGLRAKADGQVSLWSNNGEMGYYGKIPNVNLSGTTTGIRLTGELMASSVHLTNESGARGITFTVTPNQPASRVNVSAWGNTTGRSTVCEFADGVGYMFYVQRSSNNQVDVQSAGFFTLDNAAEGFSFRALSNTLFYKGGTPVGGGGYDGQLNAMAPFYQKIDTRPNGDNNFYPLVKGRINITAGYPLAYSFGVVTSGTTFPIIQIQAKTDSPSADRLWSFNPGDGSFNSPGTVFAGGARLATDGNIFGSAWYDGGANGWINNWVYANFVNQIAFGAVETAKVWRGYGFNDQPPFVITGVRNDTADEYIDWVARRPLRYAKNGSWRDVGPGA
Physico‐chemical
properties
protein length:835 AA
molecular weight: 88632,84590 Da
isoelectric point:5,59838
aromaticity:0,11257
hydropathy:-0,25880

Domains

Domains [InterPro]
DC_0930
STR
1–440
DC_0930 G3DSA:6.20.70.20 DC_2105
XMN69752.1
1 835
Architecture
STR
RBD
STR 1-440 | RBD 736-833 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMN69752.1
1 835
Domain Start End Length (AA) Confidence
N-terminal 1 490 490 0,5442
Central domain 491 689 200 0,3795
C-terminal 690 835 145 0,9478
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-490
Central
491-689
C-terminal
690-835

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SeEM_UALMA_PCSE1
[NCBI] 		3369621 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMN69752.1 [NCBI]
Genbank nucleotide accession
PQ314491 [NCBI]
CDS location
range 43349 -> 45856
strand +
CDS
ATGGCCACACCTTTAATTACATCAGCTTTTGCTCGAATCGGTGACACACGAAACCCTCCGCAAACTGACCCAAATGGCTCAGTAAACTGGGATAATGGTTACACGCCGAACTATGAAATTGACCTCAGCTCTGGCGACCCATTAGCAAAAGCTGTAGAGCGTGACGTTATGAACTATCTGTTCAATATTTTGACAGATAATGCTCGTCAATATCAAAAGAATGGTAATCCTGAATGGTATAGCAATATGCCTAATGGATACCCAATTGGCGCAATCGTTCTTGTTGCCATCACTGGCGGCTTTGACCTTTATCGTTCCCTGGCTAATAATAACACGAGCAATCCTGTAGGCTCTTCTGCCTGGGACAAAATTTGGACTTCCGCTCAGCTTCGTGGAATTATTCCAATGCCACTCGGCGGCCAGCAATATATTTCTGGCGGTTTAGTACCTGCTGGAACCGATATTAAAAGCCTCACTGATGGCACATATATTGTTGCCACAGATTCTATCGCCGCGCAAGTGGCGAATCTTCCGATTGCCAAAGCAGGTATGCTGGAAGTTAAAAAGTTCAGTGCTGGTGGCCAACCTGCTAGTGTGTACCGCTATAACGCGACAAGCAATGATTCATATTGGTTGATTGATGGCCCTGGTAGCACAGGAATTTGGAACAGAGGCGTAAACAGCAATGAAATAGGATATACTGCTGGGTTCATTCCTCGAATTCAAACTGGCGGATTCTCTGCTCAAGATGTCGGCACCAATTATTTTCGTATTGGGGTTCAGCAGGCAGCAGACCTTAAATATTCAGAGATTTTTGCAGACAGCAATGCTGCAGAAGGTGCTATTGTATCAGGGCTGCTATTCAATTATGGCGGAAATAGCGCAAAATTTGGTGCAATTCGCGGCTCGAATAACACCCTGAGTACTGTTGCGCTTATGGTGGACAATAGCAAGAAATTTGATATTGCTCCTGCAGATCTTGGCGCAATAAACTGGTATACATCAACTTTCGGAATTAATGGTTCATCGCCGCAGGTTCAGCTTAGAAGCCCAAATGGGCAAGGCATAGTATCTATCGGATCAGACCAAAATGCCGGGACTATGTCAATTTGGACTCAGAGCGGAACATCAGCTCAATTCCGTAGCAATGGATTATACTACCAAGGTCAAACGACTGGCGAAAATGGTGCTATGGTATCCGGTCAGGTTGATGCAGGGGCATGGAATGACTGGAAAACCAAATCTGCTGGTGTAGGCATTAGCATTGCTACACAAAATGCCGCGCATAATATCTGGAAGGCAACTAACTGGGGCAATAACCATACTGCTGCTATGCAGGTGTCCCACCCATCCAATCAATCAGATTATGCAGTGGCTCGTTTAGTAGTTTTCGCTGGAACAGGGAAAGCTGATGCAGGGTTCCAGTTTGCAGGGAATGGGTCATTCACAGCAGCGTCAGGTGCATTCACCAATATTCAAATTTCCACTCTTCTTGCGATAGGCGATAATGACTCAGGGCTTAGAGCGAAAGCAGATGGTCAGGTGTCTCTTTGGTCTAACAATGGTGAGATGGGTTACTATGGGAAGATTCCGAATGTCAATCTTAGCGGTACTACAACAGGAATAAGATTGACAGGGGAGCTAATGGCATCCTCAGTTCATTTGACAAATGAATCTGGGGCCAGAGGGATTACGTTCACTGTAACACCAAATCAGCCAGCTAGTCGCGTTAATGTTAGTGCCTGGGGGAATACAACTGGTCGCTCAACTGTCTGTGAATTTGCGGACGGCGTTGGGTACATGTTCTATGTTCAGAGGTCATCAAACAACCAAGTCGATGTCCAAAGTGCAGGGTTCTTTACTCTAGATAATGCAGCAGAAGGGTTCTCATTCCGTGCCCTTAGCAACACACTTTTCTATAAAGGTGGCACACCAGTTGGCGGCGGCGGTTATGATGGCCAGCTTAATGCAATGGCTCCTTTTTACCAAAAAATTGACACGCGCCCTAATGGCGACAACAATTTCTATCCACTGGTGAAAGGCCGTATAAACATCACAGCAGGATACCCGCTGGCATATTCATTTGGGGTTGTTACAAGCGGAACAACGTTCCCTATAATCCAGATTCAGGCCAAAACTGACTCACCTTCTGCAGACCGTCTTTGGTCATTCAACCCAGGAGATGGATCATTCAATTCACCTGGTACAGTCTTTGCTGGCGGTGCAAGACTAGCAACTGATGGTAATATTTTTGGCAGTGCTTGGTACGATGGTGGCGCAAATGGCTGGATAAACAACTGGGTTTATGCTAACTTCGTCAACCAAATCGCATTCGGTGCAGTGGAAACAGCTAAAGTTTGGCGCGGTTATGGATTCAATGACCAGCCTCCATTCGTTATTACTGGAGTCAGGAATGACACAGCAGATGAATATATTGACTGGGTTGCACGCCGCCCATTGCGGTATGCTAAGAACGGAAGTTGGCGCGATGTTGGACCAGGAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c4bf0e08b52548c216b4d71a8d1ed5265402b017e1376b7f1eecf04d782d940
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3008
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50