Protein

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Genbank accession
AMR59811.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVTDKSLTNEEIRARYFQRDLPIDRHGNFMERIGAQDQGRTGFCALLHYHLIEGMSDKEALARMKLYEMSEIEANFTLKRTKEFIANVLEIDLDEIRGNLKSTARYIYEDVQKMLLELDHRYEDERHGYIEFEGSHFQADESSRTILGQYIQADTAPEYWLDTLNTKHSPFTVDQCKALLGAIVARDQVLHSAMADNKRQIRELAEKRDYTGLKTLSESLGI
Physico‐chemical
properties
protein length:223 AA
molecular weight: 25856,84450 Da
isoelectric point:5,32407
aromaticity:0,08520
hydropathy:-0,59148

Domains

Domains [InterPro]
DC_0377
STR
7–125
DC_0377 IPR025484
IPR025484
STR
121–205
IPR025484
AMR59811.1
1 223
Architecture
STR
STR 7-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage SEGD1
[NCBI] 		1805456 Uroviricota > Caudoviricetes > Chimalliviridae > Seoulvirus SPN3US >
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMR59811.1 [NCBI]
Genbank nucleotide accession
KU726251.1 [NCBI]
CDS location
range 137605 -> 138276
strand -
CDS
ATGTCTGTTACTGACAAAAGCTTAACGAACGAAGAGATCCGCGCCCGTTATTTCCAGCGTGATTTGCCGATTGATCGCCACGGTAATTTCATGGAACGAATCGGTGCGCAGGATCAGGGCCGTACAGGCTTTTGCGCTCTGCTCCATTATCATCTCATCGAAGGGATGTCTGATAAAGAAGCCCTGGCACGCATGAAGCTGTATGAGATGTCGGAGATTGAAGCTAACTTCACATTGAAACGCACGAAAGAGTTTATTGCTAATGTGCTGGAGATTGACCTCGACGAAATTCGCGGGAATCTAAAATCTACCGCACGTTACATTTACGAAGACGTGCAGAAGATGCTGTTGGAACTTGACCACCGCTACGAAGATGAGCGTCATGGTTATATCGAGTTTGAAGGTAGTCACTTTCAAGCCGATGAATCGTCGCGTACCATCCTCGGTCAATACATTCAGGCAGATACCGCACCAGAATACTGGCTCGATACGCTGAATACTAAGCACAGTCCGTTTACAGTAGACCAATGTAAAGCGTTGTTGGGCGCTATTGTTGCACGCGACCAAGTGTTGCACTCAGCAATGGCAGATAACAAACGCCAAATCCGTGAGTTAGCTGAAAAGCGCGATTACACTGGATTAAAAACATTGTCCGAATCTCTCGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
77f093bb8ba6f5b300409ecc626f1ed6e82f1a3bbda645d3e8877b3189871b2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6996
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a polyvalent bacteriophage, SEGD1, simultaneously inhibiting both Salmonella enterica and Escherichia coli O157:H7 Fan,J. and Ma,J. 2018-03-02 — GenBank